Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4603g00034 ATGGAGCCAGCATCAGCGGATTCATCATCTCAACCTATCAATTCAGCTCCCAATATTGAGCATCATTCCACCAATGTTTCTGGACAAAATGACAATGCCCATAACCCGGCACCCTCATTATCGGCTACTGACAAATCATCCCCGGTGACAAATCTGAAATTTTCACAGGCCTTTAGATTAAGACAAGGAGACTCCCAGACTGGAGATACTGGGATGTCAAATTTTTCTTTCCTTACCAGTGGGCTTGGACGAATGCTATCAATGCCATCTGTTAGCAATGAGACTGCTCCGGTCGATTCAGGGGCTGAGAAGCCTAATTTAATTGAATCATTTACCAAAGGGTTAGTTGACTCATCAAAGACTGCAGTAAAGAAGATGCAGGTGAAGGCACGCCATATTGTCTCTCAAAACAAACGTAGATACCAGGATGAAGAGTTCGATTTGGATCTGGCATACATTACCGAAAATATAATTGCTATGGGATTTCCAGCTGGTGATTCTAGCTCTGGAGTTTTCGGATATATCGAGGGTTTCTATCGCAATCACATGGAAGAAGTGATTAGATTTCTCGAAACTCGTCATGAGGGAAAGTACAAAGTATATAATCTTTGCTCAGAGAGGTTGTATGATGCATCACTATTCAAGGGGAAGGCTGCAAGTTTCCCATTTGATGATCATAATTGCCCTCCTATTGAACTTATAGCATCATTTTGTAGAAGTGCATATTCATGGTTAAAGGAGGATATTCAAAATGTGGTAGTTGTTCACTGTAAAGCTGGCATGGGGAGAACAGGGGTGATGATTTGTAGCCTTCTTTTGTTTCTTAAGTTCTTCCCAACTGCTGAGGAGGCCATTAATTGCTTTAACCAGAAAAGATGCATTGATGGGAAAGCTCTAGTTCTTCCTAGTCAGATTAGGTATGTCAAATACTTTGAACGGACGTTAACACACTTCAAAGGAGAGGTTCAGCCTGGACGGAGGTGCATGCTAAGAGGATTTCGGCTTCACAAATGCCCTTATTGGATCAGGCCTTCCATTACGATTTCTGATCATACTGGAATTCTTTTCACCACAAAAAAGCATCCAAAAACAAAGGATCTGATGCCGGAAGACTTTTGGATCAGTATTCCGAAGAAAGGAATTGTGGTATTTGCATTGCCTGGGGAGCCTGGTCTAACGGAGTTGGCTGGGGACTTCAAAATCTATTTTAATGATGGACAGGGAGATTTCTACTGTTGGTTAAATACAACCATGACAGAAAACAGAAAAATCTTGGACGCCTCGGATCTTGATGGTTTTGACAAGAGAAAGATCCCTGCTCCCGGATTTCAGGTCGAAGTGGTAATGGCAGATTATAACGGCACCCTACCTCCTCGTACAAAAGTCAAACCCGCCAGCAAAGGGTCTAGTAGCAACACAGGAAATGTCTCCGCTTCAGATCCGAGGCTTGCTTCTGATTCAAGAAAGAGCAAGGTTCCTACAAACGGGGATGATGACGTCTTCTCAGATAGTGAAGGAGAGGAAGCCAAAGATTCAAAGACCAGGGAAACTAAAGCCACATCTGATTTCAGAGACGGGGAAGGTCATCAAGCATCTGATACCACTACAGACCATGAGGCAACCTTGACCTCAGGGACAAAGCAGCTGTCACTCCAGCATCAAGAACGTATACAAAATAATGCTTACGAAGAAGGATCAAATAGTCCGAAAATTCAGAGAACTCCCCGGAGCCCTAAAATAGAGTACGCTGAGGCAAATGAGATCAAGGCCATGGCAGCCGATGCTTCAGTTTTTTCTTTCGGAGATGAAGATTTTGAAAGCGATTGA 1827 0.4319 MEPASADSSSQPINSAPNIEHHSTNVSGQNDNAHNPAPSLSATDKSSPVTNLKFSQAFRLRQGDSQTGDTGMSNFSFLTSGLGRMLSMPSVSNETAPVDSGAEKPNLIESFTKGLVDSSKTAVKKMQVKARHIVSQNKRRYQDEEFDLDLAYITENIIAMGFPAGDSSSGVFGYIEGFYRNHMEEVIRFLETRHEGKYKVYNLCSERLYDASLFKGKAASFPFDDHNCPPIELIASFCRSAYSWLKEDIQNVVVVHCKAGMGRTGVMICSLLLFLKFFPTAEEAINCFNQKRCIDGKALVLPSQIRYVKYFERTLTHFKGEVQPGRRCMLRGFRLHKCPYWIRPSITISDHTGILFTTKKHPKTKDLMPEDFWISIPKKGIVVFALPGEPGLTELAGDFKIYFNDGQGDFYCWLNTTMTENRKILDASDLDGFDKRKIPAPGFQVEVVMADYNGTLPPRTKVKPASKGSSSNTGNVSASDPRLASDSRKSKVPTNGDDDVFSDSEGEEAKDSKTRETKATSDFRDGEGHQASDTTTDHEATLTSGTKQLSLQHQERIQNNAYEEGSNSPKIQRTPRSPKIEYAEANEIKAMAADASVFSFGDEDFESD 608
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4603g00034 608 FunFam Phosphatidylinositol 3,4,5-trisphosphate 3-phosphatase TPTE2 124 321 - -
Pral4603g00034 608 ProSiteProfiles Phosphatase tensin-type domain profile. 139 318 IPR029023 -
Pral4603g00034 608 PANTHER PHOSPHATASE WITH HOMOLOGY TO TENSIN 116 571 - -
Pral4603g00034 608 MobiDBLite consensus disorder prediction 464 483 - -
Pral4603g00034 608 SMART PTEN_C2_2 323 451 IPR014020 -
Pral4603g00034 608 ProSitePatterns Tyrosine specific protein phosphatases active site. 255 265 IPR016130 GO:0016311|GO:0016791
Pral4603g00034 608 MobiDBLite consensus disorder prediction 1 48 - -
Pral4603g00034 608 CDD PTP_PTEN 149 313 IPR045101 GO:0016791
Pral4603g00034 608 ProSiteProfiles C2 tensin-type domain profile. 325 452 IPR014020 -
Pral4603g00034 608 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 152 318 IPR029021 -
Pral4603g00034 608 MobiDBLite consensus disorder prediction 484 498 - -
Pral4603g00034 608 MobiDBLite consensus disorder prediction 506 534 - -
Pral4603g00034 608 Pfam Protein-tyrosine phosphatase 225 277 IPR000242 GO:0004725|GO:0006470
Pral4603g00034 608 MobiDBLite consensus disorder prediction 535 574 - -
Pral4603g00034 608 Gene3D Protein tyrosine phosphatase superfamily 124 321 IPR029021 -
Pral4603g00034 608 MobiDBLite consensus disorder prediction 456 577 - -
Pral4603g00034 608 ProSiteProfiles Tyrosine specific protein phosphatases domain profile. 253 292 IPR000387 GO:0016311|GO:0016791
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4603g00034 Pral-Chr4603 190639 197505 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4603g00034 27 608 Protein tyrosine phosphatase (PTP) family AT3G19420 61.745 0.0 716
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4603g00034 K01110 - gmx:100801622 869.381