LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Pral4603g00034	ATGGAGCCAGCATCAGCGGATTCATCATCTCAACCTATCAATTCAGCTCCCAATATTGAGCATCATTCCACCAATGTTTCTGGACAAAATGACAATGCCCATAACCCGGCACCCTCATTATCGGCTACTGACAAATCATCCCCGGTGACAAATCTGAAATTTTCACAGGCCTTTAGATTAAGACAAGGAGACTCCCAGACTGGAGATACTGGGATGTCAAATTTTTCTTTCCTTACCAGTGGGCTTGGACGAATGCTATCAATGCCATCTGTTAGCAATGAGACTGCTCCGGTCGATTCAGGGGCTGAGAAGCCTAATTTAATTGAATCATTTACCAAAGGGTTAGTTGACTCATCAAAGACTGCAGTAAAGAAGATGCAGGTGAAGGCACGCCATATTGTCTCTCAAAACAAACGTAGATACCAGGATGAAGAGTTCGATTTGGATCTGGCATACATTACCGAAAATATAATTGCTATGGGATTTCCAGCTGGTGATTCTAGCTCTGGAGTTTTCGGATATATCGAGGGTTTCTATCGCAATCACATGGAAGAAGTGATTAGATTTCTCGAAACTCGTCATGAGGGAAAGTACAAAGTATATAATCTTTGCTCAGAGAGGTTGTATGATGCATCACTATTCAAGGGGAAGGCTGCAAGTTTCCCATTTGATGATCATAATTGCCCTCCTATTGAACTTATAGCATCATTTTGTAGAAGTGCATATTCATGGTTAAAGGAGGATATTCAAAATGTGGTAGTTGTTCACTGTAAAGCTGGCATGGGGAGAACAGGGGTGATGATTTGTAGCCTTCTTTTGTTTCTTAAGTTCTTCCCAACTGCTGAGGAGGCCATTAATTGCTTTAACCAGAAAAGATGCATTGATGGGAAAGCTCTAGTTCTTCCTAGTCAGATTAGGTATGTCAAATACTTTGAACGGACGTTAACACACTTCAAAGGAGAGGTTCAGCCTGGACGGAGGTGCATGCTAAGAGGATTTCGGCTTCACAAATGCCCTTATTGGATCAGGCCTTCCATTACGATTTCTGATCATACTGGAATTCTTTTCACCACAAAAAAGCATCCAAAAACAAAGGATCTGATGCCGGAAGACTTTTGGATCAGTATTCCGAAGAAAGGAATTGTGGTATTTGCATTGCCTGGGGAGCCTGGTCTAACGGAGTTGGCTGGGGACTTCAAAATCTATTTTAATGATGGACAGGGAGATTTCTACTGTTGGTTAAATACAACCATGACAGAAAACAGAAAAATCTTGGACGCCTCGGATCTTGATGGTTTTGACAAGAGAAAGATCCCTGCTCCCGGATTTCAGGTCGAAGTGGTAATGGCAGATTATAACGGCACCCTACCTCCTCGTACAAAAGTCAAACCCGCCAGCAAAGGGTCTAGTAGCAACACAGGAAATGTCTCCGCTTCAGATCCGAGGCTTGCTTCTGATTCAAGAAAGAGCAAGGTTCCTACAAACGGGGATGATGACGTCTTCTCAGATAGTGAAGGAGAGGAAGCCAAAGATTCAAAGACCAGGGAAACTAAAGCCACATCTGATTTCAGAGACGGGGAAGGTCATCAAGCATCTGATACCACTACAGACCATGAGGCAACCTTGACCTCAGGGACAAAGCAGCTGTCACTCCAGCATCAAGAACGTATACAAAATAATGCTTACGAAGAAGGATCAAATAGTCCGAAAATTCAGAGAACTCCCCGGAGCCCTAAAATAGAGTACGCTGAGGCAAATGAGATCAAGGCCATGGCAGCCGATGCTTCAGTTTTTTCTTTCGGAGATGAAGATTTTGAAAGCGATTGA	1827	0.4319	MEPASADSSSQPINSAPNIEHHSTNVSGQNDNAHNPAPSLSATDKSSPVTNLKFSQAFRLRQGDSQTGDTGMSNFSFLTSGLGRMLSMPSVSNETAPVDSGAEKPNLIESFTKGLVDSSKTAVKKMQVKARHIVSQNKRRYQDEEFDLDLAYITENIIAMGFPAGDSSSGVFGYIEGFYRNHMEEVIRFLETRHEGKYKVYNLCSERLYDASLFKGKAASFPFDDHNCPPIELIASFCRSAYSWLKEDIQNVVVVHCKAGMGRTGVMICSLLLFLKFFPTAEEAINCFNQKRCIDGKALVLPSQIRYVKYFERTLTHFKGEVQPGRRCMLRGFRLHKCPYWIRPSITISDHTGILFTTKKHPKTKDLMPEDFWISIPKKGIVVFALPGEPGLTELAGDFKIYFNDGQGDFYCWLNTTMTENRKILDASDLDGFDKRKIPAPGFQVEVVMADYNGTLPPRTKVKPASKGSSSNTGNVSASDPRLASDSRKSKVPTNGDDDVFSDSEGEEAKDSKTRETKATSDFRDGEGHQASDTTTDHEATLTSGTKQLSLQHQERIQNNAYEEGSNSPKIQRTPRSPKIEYAEANEIKAMAADASVFSFGDEDFESD	608

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Annotation information

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Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Pral4603g00034	608	FunFam	Phosphatidylinositol 3,4,5-trisphosphate 3-phosphatase TPTE2	124	321	-	-
	Pral4603g00034	608	ProSiteProfiles	Phosphatase tensin-type domain profile.	139	318	IPR029023	-
	Pral4603g00034	608	PANTHER	PHOSPHATASE WITH HOMOLOGY TO TENSIN	116	571	-	-
	Pral4603g00034	608	MobiDBLite	consensus disorder prediction	464	483	-	-
	Pral4603g00034	608	SMART	PTEN_C2_2	323	451	IPR014020	-
	Pral4603g00034	608	ProSitePatterns	Tyrosine specific protein phosphatases active site.	255	265	IPR016130	GO:0016311\|GO:0016791
	Pral4603g00034	608	MobiDBLite	consensus disorder prediction	1	48	-	-
	Pral4603g00034	608	CDD	PTP_PTEN	149	313	IPR045101	GO:0016791
	Pral4603g00034	608	ProSiteProfiles	C2 tensin-type domain profile.	325	452	IPR014020	-
	Pral4603g00034	608	SUPERFAMILY	(Phosphotyrosine protein) phosphatases II	152	318	IPR029021	-

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Pral4603g00034	Pral-Chr4603	190639	197505	Dispersed/Wgd

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Pral4603g00034	27	608	Protein tyrosine phosphatase (PTP) family	AT3G19420	61.745	0.0	716

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Pral4603g00034	K01110		-	gmx:100801622	869.381

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