Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4603g00028 ATGCCTCTTTCCGAAACTCTCTTTCCTCTCTTCTTCTTGTGCTTCACTCTCTCCACCGTCCTTTCCTATCAGTCTTTTCCGGCTACCTCCAAACTGCTCCTCTCCTCCGACGCCGTTTCGTTGCTCTCTTTCAAGTCCAAAGCCGACCTCGACAACAAGCTACTCTATGTCCTTCACGAGCGCTTCGATTACTGTCAATGGCAGGGCGTGAAGTGCGCACAGGGCCGAGTGGTTCGCTTCTTCCTTCAGGGCTCTGGTCTTCGGGGCGTCTTCGCTTTCGACACCCTCTCTCGCCTCGACCAGCTTCGAGTCCTCTGCCTCCGCAATAACTCCCTCTTCGGTCCCATCCCCGATCTCTCCCCCCTCTTCAACCTGAAGGGGCTGCTTCTTGACCATAATTTCTTCTCAGGTTCGTTACCTCCCTCGTTTCTTTTGCTTCATCGCCTTCGTACTCTTTCTCTATCTCATAACAACCTCACCGGTTCAGTCCCTGTCGAGTTAGTTAATTTGGACCATTTAGTAACCCTCCGCCTTGAGTCGAACGGTTTTAATGGAACCATTCCGCCGTTGAACCAGTCCTCCCTCCTTATCTTCAATGTCTCCGGCAATAACCTCACAGGGCCGATTCCGGCAACTCTCACTCTTGCTCGATTCCACACGGCGTCGTTTTCGGGGAATCCGGGTCTATGTGGGGACATTATTTCCAAAGCATGTGATCATCCTAGGCCTCGAACCTTTGGTTCTTCCAATGCCTCTGTCTCATTGGGCCAAAGCGCTGAATCACAGGGCAACATCGTCGTTTCTTCGGTGACTAGCAAGAAGCACAAGAGTAACAGCCTGATTCTTGGGTCCACTATTGGTGCCTCGATTCTGATTGCGTCTTTTCTAGGGCTTATCGCGGTGGTCAGGAGACGGAGTGTTTCGAGTAATTTGGAAAGCCCAAAAATGGCGGCAATGGACGTTATGGATGCGCCTCCGGGGAAGAAAATGGAGGTAATCGATGGAGCTGATCATCATAATAGAGAGAAATTGGTGTTCTGTTGTGGAGAGGCGCAACTGTATACACTGGAGCAGTTGATGAGGGGGTCGGCCGAGTTGCTGGGAAGGGGTAGCATTGGGACTACGTACAAAGCAGTCGTGGATGGGAGGTTCACTTTGACAGTAAAGAGGCTAGATGCTGGTAAGAGTGCAAGAACAAGTGGGCAAGTATTTGAGAGGCACATGGAAATGGTGGGTCAGCTTCGGCATCCAAATTTAGTACCGGTTAGAGCTTATTTTCAGGCTGAGACAGAGAGGCTGGTGATCTGTGATTATCAGTCTAATGGCAGCCTCTTCAGCCTCATTCATGGTTCAAGATCAGCAAGAGCAAAGCCTCTTCACTGGACATCGTGCTTAAAAATAGCTGAAGACATAGCTCATGGACTCGCCTACATACACCAAACATCAAGATTAATCCACGGCAACCTAAAGTCCTCCAATGTCCTTCTTGGAGTGGATTTTGAAGCTTGTGTTACAGACTATTGTTTGTCCCTTCTCGCGGACTCTTCATCCGGTGATGATCCTGATTCTGCTGCCTATAAAGCACCTGAAACTCGCAACACTAATCGCCCACCTACTTCTAAATCTGATGTCTATACATTTGGGGTGCTTCTACTGGAGCTTCTAACTTCTAAATACCCTTCTCAGCATCCCTTCCTTGTGCCCATGGATTTGCAGGATTGGGTTAGAGCAATGAGGAACGACTATGGTGCTGAAGATAAACAGCTGGGAATGCTCACAGAGGTCGCAAGTATTTGCACTGTTATATCACCTGAGCAGAGACCAGCAATGTGGCAAGTCTTGAAGATGATACAGGAAATAAAGAAGAGTGTCACACTCGAAGGTCATATATCTGCTGGGTTTTCATAG 1908 0.49 MPLSETLFPLFFLCFTLSTVLSYQSFPATSKLLLSSDAVSLLSFKSKADLDNKLLYVLHERFDYCQWQGVKCAQGRVVRFFLQGSGLRGVFAFDTLSRLDQLRVLCLRNNSLFGPIPDLSPLFNLKGLLLDHNFFSGSLPPSFLLLHRLRTLSLSHNNLTGSVPVELVNLDHLVTLRLESNGFNGTIPPLNQSSLLIFNVSGNNLTGPIPATLTLARFHTASFSGNPGLCGDIISKACDHPRPRTFGSSNASVSLGQSAESQGNIVVSSVTSKKHKSNSLILGSTIGASILIASFLGLIAVVRRRSVSSNLESPKMAAMDVMDAPPGKKMEVIDGADHHNREKLVFCCGEAQLYTLEQLMRGSAELLGRGSIGTTYKAVVDGRFTLTVKRLDAGKSARTSGQVFERHMEMVGQLRHPNLVPVRAYFQAETERLVICDYQSNGSLFSLIHGSRSARAKPLHWTSCLKIAEDIAHGLAYIHQTSRLIHGNLKSSNVLLGVDFEACVTDYCLSLLADSSSGDDPDSAAYKAPETRNTNRPPTSKSDVYTFGVLLLELLTSKYPSQHPFLVPMDLQDWVRAMRNDYGAEDKQLGMLTEVASICTVISPEQRPAMWQVLKMIQEIKKSVTLEGHISAGFS 635
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4603g00028 635 Gene3D Ribonuclease Inhibitor 147 240 IPR032675 -
Pral4603g00028 635 ProSiteProfiles Protein kinase domain profile. 361 626 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4603g00028 635 SUPERFAMILY Protein kinase-like (PK-like) 365 622 IPR011009 -
Pral4603g00028 635 SUPERFAMILY L domain-like 44 231 - -
Pral4603g00028 635 Gene3D Ribonuclease Inhibitor 37 146 IPR032675 -
Pral4603g00028 635 Gene3D Transferase(Phosphotransferase) domain 1 440 630 - -
Pral4603g00028 635 FunFam Probable inactive receptor kinase At5g67200 36 146 - -
Pral4603g00028 635 Gene3D Phosphorylase Kinase; domain 1 350 438 - -
Pral4603g00028 635 FunFam Leucine-rich repeat receptor-like protein kinase 148 240 - -
Pral4603g00028 635 Pfam Protein tyrosine and serine/threonine kinase 365 615 IPR001245 GO:0004672|GO:0006468
Pral4603g00028 635 MobiDBLite consensus disorder prediction 516 539 - -
Pral4603g00028 635 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 12 622 IPR046959 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4603g00028 Pral-Chr4603 163725 166939 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4603g00028 21 626 Receptor kinase-like Gene Family AT3G50230 53.344 0.0 613
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Pral4603g00028 PK_Tyr_Ser-Thr 9.3e-28 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4603g00028 - - qsa:O6P43_033846 798.119