Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4603g00025 ATGGAAGCTGAGCAAGGGGCTATGGGCGCCAAGAAGAGAGGGGTCGAAGGAGAGAGAAGGTACAAAGGGATTAGGATGAGGAAGTGGGGCAAGTGGGTCGCTGAAATCAGAGAACCCAATAAGCGTTCCAGGATTTGGCTCGGATCCTATTCTACCCCCGTCGCCGCCGCCAGAGCCTACGACACCGCCGTTTTCTATCTCAGAGGACCCTCCGCTCGCCTTAATTTCCCGGAGCTTCTCGCCGGAGAAGGCTGCCTGGCCGCCTCCGGCGACTTGTCGGCGGCTTCGATTCGTAAGAAAGCTATCGAAGTCGGCGCCAGAGTGGACGCCCTGCAGGCTGTCCCCCACCACCACCCGTCAGCGGAGGCATCGGAGCTCATACCTCGCGGTGCCGGAGCATGTGTTGACCTGAACAAGATGCCCGAACCCGAGAACCCGGAGTGTAACTGA 450 0.5978 MEAEQGAMGAKKRGVEGERRYKGIRMRKWGKWVAEIREPNKRSRIWLGSYSTPVAAARAYDTAVFYLRGPSARLNFPELLAGEGCLAASGDLSAASIRKKAIEVGARVDALQAVPHHHPSAEASELIPRGAGACVDLNKMPEPENPECN 149
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4603g00025 149 SMART rav1_2 20 83 IPR001471 GO:0003700|GO:0006355
Pral4603g00025 149 ProSiteProfiles AP2/ERF domain profile. 20 77 IPR001471 GO:0003700|GO:0006355
Pral4603g00025 149 Pfam AP2 domain 20 69 IPR001471 GO:0003700|GO:0006355
Pral4603g00025 149 CDD AP2 20 79 IPR001471 GO:0003700|GO:0006355
Pral4603g00025 149 Gene3D AP2/ERF domain 19 78 IPR036955 GO:0003700|GO:0006355
Pral4603g00025 149 PRINTS Ethylene responsive element binding protein signature 21 32 IPR001471 GO:0003700|GO:0006355
Pral4603g00025 149 PRINTS Ethylene responsive element binding protein signature 59 79 IPR001471 GO:0003700|GO:0006355
Pral4603g00025 149 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR RAP2-1-RELATED 9 146 - -
Pral4603g00025 149 FunFam Ethylene-responsive transcription factor 2 19 78 - -
Pral4603g00025 149 SUPERFAMILY DNA-binding domain 20 78 IPR016177 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4603g00025 Pral-Chr4603 139785 140664 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4603g00025 7 147 AP2-EREBP Transcription Factor Family AT2G23340 62.821 3.75e-53 164
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Pral4603g00025 AP2 8.8e-12 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4603g00025 K09286 - qsa:O6P43_034519 207.994