Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4603g00022 ATGTGGGATCTTAACGACTCGCCTGATCAGATAAAGGACGACGAATCGGAAGGCTGTTCTTCGCTGAATGATGATAAAGGAAAGCGGGTCGACGGATCTGTTTCCAATTCAAGTTCATCCGCGGTGGTCATGGAGGACGGATCCGCCGAAGAAGACGGAGAGGGGAGCCGAGGAATATCAGACGGGAAAGATAGCCGGAAGATGAAGAAGAAGCGAAGCAGTAAGATATTCGGGTTCTCTGTGACCCATGAAGAGTCATCCATGGATAGTGCTGAAGCTGAACCGCCTGTAACCAGACAGTTTATGCCGGTGGAGGAAGCTGACGACGTCGCCGGCGCCCCCAGCTCAGCCTTTCCTCGGTCTCACTGGGTAGGCCTAAAATTCAGCCAGCCAGAAGCGACCAGCGGCGACGGCGGTGGTGGGAAATCAGTGGAAGTGGTGTCGTCGACATCCCAGCCTATGATTAAGAAAAGTCGGCGAGGCCCACGGTCGAGAAGCTCACAGTATAGAGGAGTCACTTTTTACAGGAGAACAGGTCGATGGGAGTCTCACATATGGGATTGCGGGAAACAAGTCTATCTGGGTGGATTTGACACAGCACATGCAGCTGCTCGTGCATACGATAGAGCGGCCATTAAGTTCCGAGGAGTAGAAGCAGACATAAACTTCAACATAGAAGACTATGAAGAAGACTTGAAACAGATGGGCAATCTGACGAAGGAAGAGTTCGTGCACGTACTTCGCCGACAAAGCACTGGGTTCCCGAGAGGAAGCTCCAAATACAGAGGGGTAACCTTACACAAGTGTGGAAGATGGGAGGCTCGAATGGGCCAATTTCTAGGCAAAAAGTACGTCTATCTGGGTCTATTTGACACCGAGATTGAAGCTGCTAGGGCTTATGACAAAGCAGCAATGAAGTGCAACGGCAAGGACGCCGTCACCAATTTTGATCCCAGCATCTATGAAACTGAGCTTCATTCTGAGTCCTCGGGTAATGCTGATCACAATCTGGATTTAAGTCTGGGCAATGCGAGCTCAAATCACAGTGCTAGGCAGTCATTGGTAAATCTGGTACCAGAACAACCTAATAGAAGTAACATAGAATCTCATCGAAGAATTGGGCACGGCGAGAATGAAACGATGCGTCTTCTGAGTCGAACTCACCTTCAATCTCCAGCCGCTGATGAAACCCAGAGATATGGTCCCTACAAGACTTCTGGACAACCTCAAGTTCACCATTTTTCACATTTTCATCCCCCAAATTATCGTATTCCTAGCAGCAGTAATGGAAACGCAGGTCGTTTGGGAAGTGATCTTTCATTGTCAATGAATGATCAAGAACGATGGCAATCTGGACACTCTCAATATTTCTCGACTGCTGCAGCATCATCAGGATTCCCACAGCAGATCACTACCTCTCAAGCCTGGCTGCAGAAAAATGGGTTCCACACTTCTCTCATGCGACCCTCCTGA 1473 0.4922 MWDLNDSPDQIKDDESEGCSSLNDDKGKRVDGSVSNSSSSAVVMEDGSAEEDGEGSRGISDGKDSRKMKKKRSSKIFGFSVTHEESSMDSAEAEPPVTRQFMPVEEADDVAGAPSSAFPRSHWVGLKFSQPEATSGDGGGGKSVEVVSSTSQPMIKKSRRGPRSRSSQYRGVTFYRRTGRWESHIWDCGKQVYLGGFDTAHAAARAYDRAAIKFRGVEADINFNIEDYEEDLKQMGNLTKEEFVHVLRRQSTGFPRGSSKYRGVTLHKCGRWEARMGQFLGKKYVYLGLFDTEIEAARAYDKAAMKCNGKDAVTNFDPSIYETELHSESSGNADHNLDLSLGNASSNHSARQSLVNLVPEQPNRSNIESHRRIGHGENETMRLLSRTHLQSPAADETQRYGPYKTSGQPQVHHFSHFHPPNYRIPSSSNGNAGRLGSDLSLSMNDQERWQSGHSQYFSTAAASSGFPQQITTSQAWLQKNGFHTSLMRPS 490
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4603g00022 490 FunFam AP2-like ethylene-responsive transcription factor 167 226 - -
Pral4603g00022 490 PRINTS Ethylene responsive element binding protein signature 299 319 IPR001471 GO:0003700|GO:0006355
Pral4603g00022 490 PRINTS Ethylene responsive element binding protein signature 261 272 IPR001471 GO:0003700|GO:0006355
Pral4603g00022 490 MobiDBLite consensus disorder prediction 50 67 - -
Pral4603g00022 490 SUPERFAMILY DNA-binding domain 167 225 IPR016177 GO:0003677
Pral4603g00022 490 Gene3D AP2/ERF domain 167 226 IPR036955 GO:0003700|GO:0006355
Pral4603g00022 490 Gene3D AP2/ERF domain 259 318 IPR036955 GO:0003700|GO:0006355
Pral4603g00022 490 ProSiteProfiles AP2/ERF domain profile. 260 317 IPR001471 GO:0003700|GO:0006355
Pral4603g00022 490 CDD AP2 259 319 IPR001471 GO:0003700|GO:0006355
Pral4603g00022 490 ProSiteProfiles AP2/ERF domain profile. 168 224 IPR001471 GO:0003700|GO:0006355
Pral4603g00022 490 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 98 406 - -
Pral4603g00022 490 Pfam AP2 domain 168 216 IPR001471 GO:0003700|GO:0006355
Pral4603g00022 490 Pfam AP2 domain 259 308 IPR001471 GO:0003700|GO:0006355
Pral4603g00022 490 SMART rav1_2 260 323 IPR001471 GO:0003700|GO:0006355
Pral4603g00022 490 SMART rav1_2 168 230 IPR001471 GO:0003700|GO:0006355
Pral4603g00022 490 MobiDBLite consensus disorder prediction 1 95 - -
Pral4603g00022 490 MobiDBLite consensus disorder prediction 1 31 - -
Pral4603g00022 490 MobiDBLite consensus disorder prediction 129 168 - -
Pral4603g00022 490 FunFam AP2-like ethylene-responsive transcription factor 259 319 - -
Pral4603g00022 490 CDD AP2 168 225 IPR001471 GO:0003700|GO:0006355
Pral4603g00022 490 SUPERFAMILY DNA-binding domain 259 319 IPR016177 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4603g00022 Pral-Chr4603 113643 116997 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4603g00022 1 490 AP2-EREBP Transcription Factor Family AT4G36920 53.057 3.09e-137 401
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2 or ERF-AP2 Pral4603g00022 AP2 2.5e-10 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4603g00022 K09284 - gmx:100786333 623.239