Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4603g00020 ATGGCGTCGTCGAAGCCTCTGCCTTCGGCCTCTGCCGACGCATCGGACTCTCCCAACGGCCAATCGACAAAGAGGGAGCAAGACACAGGTTGTACTCCTAAGGACGTGCAATCGGTTATTGATTCCTTGAAAAAACAAGTTGCTGCTGAGAGGGGCATTTCCATAAAGAAAACAATGGAAGAAAGTAAAGCAAAGCTGGTCGTTGTTACAAACCACCTCCACAAGTTATCCATGGAAAGAAGATCCTGCAGCAGTACTGGCACACAGAGAAGTCTGGACCTACTGACCAGGAGGCAACAAGATGCAATTGCTATGCACAATGATATTCATGCAAGTAAAGGAGATAAGGAGAGCAATGGCTATCATGAGGATAACCATGCTTCTACAGCTGTTCTTCTAGGTTCTAATGTGGCTGTAAAAAATGCTGTTCGTCCTGTTAAACTACCTGAAGTAAAAAGATTACCTCCTTACACTACATGGATTTTTCTGGACAGAAATCAAAGAATGACTGAGGATCAGTCAGTAGTAGGTCGAAGGCGAATTTATTATGATCAAAATGGTGGAGAAGCACTTATTTGCAGTGATAGTGAGGAGGAGATGGTAGAGGAAAAAGAAGAAAGAGAATTTGTAGAATCAGAAGATTATATACTTTGCATGACTGTCAAAAAATTTGGCTTGTCTGATCTTGTTTTGGAATCACTGGCCCGGTGTTTTTCTAGAAACGCTTGTGACATTAAGGCAAGATATGATGTTATCAGCTCAAACAATGCTGAAAAGAGTTCTCAAGGTGGAAATTCGTTTCTGGACAAGGATCTTGAAGCAGCTCTTGATTCCTTTGATAACCTCTTTTGTCGACGATGTCTTCAGGCTTTCGATTGTAGATTGCATGGTTGTTCACAGGATCTCATCTTTCCTGCTGAGAAACAACCTGCATGGATGCCTCCTGATGCTGAAAATGCACCATGTGGACCAAATTGTTTTCAGTTGGTGCTGAAATCTGAAAGATTTGCCAAAGTGGTCTCTTCTGCCCCGGGCGATGTTGAAGAGAAATGCTCAAGTGGTGCTGGGGTGCAAAAATCATCTAAGAAGTTGTGTACTCCATCTGCTAGAAGGCGAATGAAGTGCAGCCGAAGTGAAAGTGCTTCCTCAAATGCAAAGAATATATCTGAGAGTAGTGACTCAGAGAATGGCCCAGGGCAGAATAATGCTTCACCTTCCCAGTCAATACCTAAAACTAAAGCTACAGGGAAAAGCGGAGTTAGTAAGAGGAACAGTAAGCGAGTGGCAGAACGTGTTCTAGTTTGCATGCAGAAGAGGCAGAAGAAAACAGTTGTGTCTGATTCTGATTCCATTGGTGAAGCTCTTGATCATTCATCGAATGAGATGATTCCTGACCCCCCAGTCACAAGTAGTGATGAGAACCTGAGGAAAGAAGAGTGTGTAAATGAGAATATGTGCAATCAAGAATTCACTGATATTAAATCGTGGAAAACTCTTGAAAAAGCTCTTCTAGATAAAGGGGTGGAAATATTTGGTAGAAACAGCTGTTTAATAGCGAGGAATCTCTTGACTGGTCTGAAGACATGTTGGGAGGTTTTCCAGTATATAAATTGCAACGAGGGAAAGATGCCAGGTCCTGTTGGTGATGCTGCAAATTCCCTTCTGGATGGCTATTCTAAGGGTAACAATGAACTGAGACGAAGATCAAGGTTTTTACGTAGAAGAGGAAGAGTCCGTCGATTGAAGTATACCTGGAAATCTGCTGCATATCATTCAATCAGGAAGAGGATTACAGAGAGAAAGGATCAGCCATGTCGTCAATATAACCCATGTGGTTGCCAATCAGCTTGTGGAAAGCAGTGTCCCTGTCTTCAAAATGGAACCTGCTGTGAGAAGTACTGTGGATGCCCCAAAAGTTGCAAGAATAGATTTCGTGGCTGTCATTGTGCTAAGAGCCAATGCCGAAGTCGACAATGCCCATGCTTTGCTGCAGATAGGGAATGTGATCCTGATGTTTGTAGGAATTGCTGGGTTGGCTGTGGTGATGGCACTCTTGGGATTCCTAGCCAAAGGGGTGATAATTATGAATGTAGGAATATGAAACTTCTTCTCAAACAGCAGCAAAGGGTTCTTCTTGGAAGGTCTGATGTATCTGGATGGGGAGCCTTCTTAAAGAACAGTGTCGGGAAGCATGAATACCTTGGAGAGTATACTGGAGAGTTAATTTCGCATAGGGAGGCAGATAAACGTGGAAAGATATATGATCGTGAGAATTCATCGTTTCTCTTTAATCTGAATGATCAGTTTGTTCTTGATGCTTATCGGAAGGGTGACAAATTGAAGTTTGCCAATCATTCTCCTGATCCAAATTGCTATGCAAAGGTTATAATGGTCGCTGGGGATCACAGGGTAGGCATTTTTGCTAAGGAACGGATTAATGCCGGGGAGGAACTGTTTTATGATTATCGCTACGAACCAGATAGGGCTCCTGCCTGGGCTCGGAAGCCTGAGGCATCTGGCTCAAAAAAAGAGGATGGTGCTCCTTCAAGTGGTCGTGCAAAGAAGCTTGCTTAA 2574 0.4328 MASSKPLPSASADASDSPNGQSTKREQDTGCTPKDVQSVIDSLKKQVAAERGISIKKTMEESKAKLVVVTNHLHKLSMERRSCSSTGTQRSLDLLTRRQQDAIAMHNDIHASKGDKESNGYHEDNHASTAVLLGSNVAVKNAVRPVKLPEVKRLPPYTTWIFLDRNQRMTEDQSVVGRRRIYYDQNGGEALICSDSEEEMVEEKEEREFVESEDYILCMTVKKFGLSDLVLESLARCFSRNACDIKARYDVISSNNAEKSSQGGNSFLDKDLEAALDSFDNLFCRRCLQAFDCRLHGCSQDLIFPAEKQPAWMPPDAENAPCGPNCFQLVLKSERFAKVVSSAPGDVEEKCSSGAGVQKSSKKLCTPSARRRMKCSRSESASSNAKNISESSDSENGPGQNNASPSQSIPKTKATGKSGVSKRNSKRVAERVLVCMQKRQKKTVVSDSDSIGEALDHSSNEMIPDPPVTSSDENLRKEECVNENMCNQEFTDIKSWKTLEKALLDKGVEIFGRNSCLIARNLLTGLKTCWEVFQYINCNEGKMPGPVGDAANSLLDGYSKGNNELRRRSRFLRRRGRVRRLKYTWKSAAYHSIRKRITERKDQPCRQYNPCGCQSACGKQCPCLQNGTCCEKYCGCPKSCKNRFRGCHCAKSQCRSRQCPCFAADRECDPDVCRNCWVGCGDGTLGIPSQRGDNYECRNMKLLLKQQQRVLLGRSDVSGWGAFLKNSVGKHEYLGEYTGELISHREADKRGKIYDRENSSFLFNLNDQFVLDAYRKGDKLKFANHSPDPNCYAKVIMVAGDHRVGIFAKERINAGEELFYDYRYEPDRAPAWARKPEASGSKKEDGAPSSGRAKKLA 857
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4603g00020 857 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE E(Z) 28 855 IPR045318 GO:0006338|GO:0042054
Pral4603g00020 857 Pfam CXC domain 646 677 IPR041355 -
Pral4603g00020 857 Gene3D SET domain 608 825 IPR046341 -
Pral4603g00020 857 CDD SET_EZH 708 824 - -
Pral4603g00020 857 SMART CXC_2 642 679 IPR033467 -
Pral4603g00020 857 FunFam Putative histone-lysine N-methyltransferase EZH2 608 825 - -
Pral4603g00020 857 SUPERFAMILY SET domain 582 828 IPR046341 -
Pral4603g00020 857 MobiDBLite consensus disorder prediction 346 425 - -
Pral4603g00020 857 ProSiteProfiles Histone-lysine N-methyltransferase (EC 2.1.1.43) family profile. 1 857 IPR025778 GO:0031519
Pral4603g00020 857 MobiDBLite consensus disorder prediction 378 422 - -
Pral4603g00020 857 ProSiteProfiles SET domain profile. 708 823 IPR001214 GO:0005515
Pral4603g00020 857 MobiDBLite consensus disorder prediction 831 857 - -
Pral4603g00020 857 Pfam SET domain 719 822 IPR001214 GO:0005515
Pral4603g00020 857 MobiDBLite consensus disorder prediction 444 472 - -
Pral4603g00020 857 ProSiteProfiles CXC domain profile. 594 693 IPR026489 -
Pral4603g00020 857 MobiDBLite consensus disorder prediction 831 850 - -
Pral4603g00020 857 SMART set_7 708 829 IPR001214 GO:0005515
Pral4603g00020 857 Coils Coil 193 213 - -
Pral4603g00020 857 MobiDBLite consensus disorder prediction 1 35 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4603g00020 Pral-Chr4603 90264 98823 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4603g00020 697 826 C2H2 Transcription Factor Family AT2G23740 27.211 1.11e-09 60.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Pral4603g00020 SET 4.8e-11 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4603g00020 - K11430 gmx:100799832 1375.92