Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4603g00019 ATGGCGTCGTCGAAGCCTCTGCCTTCGGCCTCTGCCGACGCATCGGACTCTCCCAACGGCCAATCGACAAAGAGGGAGCAAGACACAGGTTGTACTCCTAAGGACGTGCAATCGGTTATTGATTCCTTGAAAAAACAAGTTGCTGCTGAGAGGGGCATTTCCATAAAGAAAACAATGGAAGAAAGTAAAGCAAAGCTGGTCGTTGTTACAAACCACCTCCACAAGTTATCCATGGAAAGAAGATCCTGCAGCAGTACTGGCACACAGAGAAGTCTGGACCTACTGACCAGGAGGCAACAAGATGCAATTGCTATGCACAATGATATTCATGCAAGTAAAGGAGATAAGGAGAGCAATGGCTATCATGAGGATAACCATGCTTCTACAGCTGTTCTTCTAGGTTCTAATGTGGCTGTAAAAAATGCTGTTCGTCCTGTTAAACTACCTGAAGTAAAAAGATTACCTCCTTACACTACATGGATTTTTCTGGACAGAAATCAAAGAATGACTGAGGATCAGTCAGTAGTAGGTCGAAGGCGAATTTATTATGATCAAAATGGTGGAGAAGCACTTATTTGCAGTGATAGTGAGGAGGAGATGGTAGAGGAAAAAGAAGAAAGAGAATTTGTAGAATCAGAAGATTATATACTTTGCATGACTGTCAAAAAATTTGGCTTGTCTGATCTTGTTTTGGAATCACTGGCCCGGTGTTTTTCTAGAAACGCTTGTGACATTAAGGCAAGATATGATGTTATCAGCTCAAACAATGCTGAAAAGAGTTCTCAAGGTGGAAATTCGTTTCTGGACAAGGATCTTGAAGCAGCTCTTGATTCCTTTGATAACCTCTTTTGTCGACGATGTCTTGCTTTCGATTGTAGATTGCATGGTTGTTCACAGGATCTCATCTTTCCTGCTGAGAAACAACCTGCATGGATGCCTCCTGATGCTGAAAATGCACCATGTGGACCAAATTGTTTTCAGTTGGTGCTGAAATCTGAAAGATTTGCCAAAGTGGTCTCTTCTGCCCCGGGCGATGTTGAAGAGAAATGCTCAAGTGGTGCTGGGGTGCAAAAATCATCTAAGAAGTTGTGTACTCCATCTGCTAGAAGGCGAATGAAGTGCAGCCGAAGTGAAAGTGCTTCCTCAAATGCAAAGAATATATCTGAGAGTAGTGACTCAGAGAATGGCCCAGGGCAGAATAATGCTTCACCTTCCCAGTCAATACCTAAAACTAAAGCTACAGGGAAAAGCGGAGTTAGTAAGAGGAACAGTAAGCGAGTGGCAGAACGTGTTCTAGTTTGCATGCAGAAGAGGCAGAAGAAAACAGTTGTGTCTGATTCTGATTCCATTGGTGAAGCTCTTGATCATTCATCGAATGAGATGATTCCTGACCCCCCAGTCACAAGTAGTGATGAGAACCTGAGGAAAGAAGAGTGTGTAAATGAGAATATGTGCAATCAAGAATTCACTGATATTAAATCGTGGAAAACTCTTGAAAAAGCTCTTCTAGATAAAGGGGTGGAAATATTTGGTAGAAACAGCTGTTTAATAGCGAGGAATCTCTTGACTGGTCTGAAGACATGTTGGGAGGTTTTCCAGTATATAAATTGCAACGAGGGAAAGATGCCAGGTCCTGTTGGTGATGCTGCAAATTCCCTTCTGGATGGCTATTCTAAGGGTAACAATGAACTGAGACGAAGATCAAGGTTTTTACGTAGAAGAGGAAGAGTCCGTCGATTGAAGTATACCTGGAAATCTGCTGCATATCATTCAATCAGGAAGAGGATTACAGAGAGAAAGGATCAGCCATGTCGTCAATATAACCCATGTGGTTGCCAATCAGCTTGTGGAAAGCAGTGTCCCTGTCTTCAAAATGGAACCTGCTGTGAGAAGTACTGTGGATGCCCCAAAAGTTGCAAGAATAGATTTCGTGGCTGTCATTGTGCTAAGAGCCAATGCCGAAGTCGACAATGCCCATGCTTTGCTGCAGATAGGGAATGTGATCCTGATGTTTGTAGGAATTGCTGGGTTGGCTGTGGTGATGGCACTCTTGGGATTCCTAGCCAAAGGGGTGATAATTATGAATGTAGGAATATGAAACTTCTTCTCAAACAGCAGCAAAGGGTTCTTCTTGGAAGGTCTGATGTATCTGGATGGGGAGCCTTCTTAAAGAACAGTGTCGGGAAGCATGAATACCTTGGAGAGTATACTGGAGAGTTAATTTCGCATAGGGAGGCAGATAAACGTGGAAAGATATATGATCGTGAGAATTCATCGTTTCTCTTTAATCTGAATGATCAGTTTGTTCTTGATGCTTATCGGAAGGGTGACAAATTGAAGTTTGCCAATCATTCTCCTGATCCAAATTGCTATGCAAAGGTTATAATGGTCGCTGGGGATCACAGGGTAGGCATTTTTGCTAAGGAACGGATTAATGCCGGGGAGGAACTGTTTTATGATTATCGCTACGAACCAGATAGGGCTCCTGCCTGGGCTCGGAAGCCTGAGGCATCTGGCTCAAAAAAAGAGGATGGTGCTCCTTCAAGTGGTCGTGCAAAGAAGCTTGCTTAA 2571 0.4325 MASSKPLPSASADASDSPNGQSTKREQDTGCTPKDVQSVIDSLKKQVAAERGISIKKTMEESKAKLVVVTNHLHKLSMERRSCSSTGTQRSLDLLTRRQQDAIAMHNDIHASKGDKESNGYHEDNHASTAVLLGSNVAVKNAVRPVKLPEVKRLPPYTTWIFLDRNQRMTEDQSVVGRRRIYYDQNGGEALICSDSEEEMVEEKEEREFVESEDYILCMTVKKFGLSDLVLESLARCFSRNACDIKARYDVISSNNAEKSSQGGNSFLDKDLEAALDSFDNLFCRRCLAFDCRLHGCSQDLIFPAEKQPAWMPPDAENAPCGPNCFQLVLKSERFAKVVSSAPGDVEEKCSSGAGVQKSSKKLCTPSARRRMKCSRSESASSNAKNISESSDSENGPGQNNASPSQSIPKTKATGKSGVSKRNSKRVAERVLVCMQKRQKKTVVSDSDSIGEALDHSSNEMIPDPPVTSSDENLRKEECVNENMCNQEFTDIKSWKTLEKALLDKGVEIFGRNSCLIARNLLTGLKTCWEVFQYINCNEGKMPGPVGDAANSLLDGYSKGNNELRRRSRFLRRRGRVRRLKYTWKSAAYHSIRKRITERKDQPCRQYNPCGCQSACGKQCPCLQNGTCCEKYCGCPKSCKNRFRGCHCAKSQCRSRQCPCFAADRECDPDVCRNCWVGCGDGTLGIPSQRGDNYECRNMKLLLKQQQRVLLGRSDVSGWGAFLKNSVGKHEYLGEYTGELISHREADKRGKIYDRENSSFLFNLNDQFVLDAYRKGDKLKFANHSPDPNCYAKVIMVAGDHRVGIFAKERINAGEELFYDYRYEPDRAPAWARKPEASGSKKEDGAPSSGRAKKLA 856
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4603g00019 856 MobiDBLite consensus disorder prediction 345 424 - -
Pral4603g00019 856 MobiDBLite consensus disorder prediction 377 421 - -
Pral4603g00019 856 Pfam CXC domain 645 676 IPR041355 -
Pral4603g00019 856 Gene3D SET domain 607 824 IPR046341 -
Pral4603g00019 856 ProSiteProfiles Histone-lysine N-methyltransferase (EC 2.1.1.43) family profile. 1 856 IPR025778 GO:0031519
Pral4603g00019 856 Pfam SET domain 718 821 IPR001214 GO:0005515
Pral4603g00019 856 MobiDBLite consensus disorder prediction 830 856 - -
Pral4603g00019 856 SMART set_7 707 828 IPR001214 GO:0005515
Pral4603g00019 856 ProSiteProfiles CXC domain profile. 593 692 IPR026489 -
Pral4603g00019 856 MobiDBLite consensus disorder prediction 443 471 - -
Pral4603g00019 856 SUPERFAMILY SET domain 581 827 IPR046341 -
Pral4603g00019 856 CDD SET_EZH 707 823 - -
Pral4603g00019 856 MobiDBLite consensus disorder prediction 830 849 - -
Pral4603g00019 856 FunFam Putative histone-lysine N-methyltransferase EZH2 607 824 - -
Pral4603g00019 856 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE E(Z) 28 854 IPR045318 GO:0006338|GO:0042054
Pral4603g00019 856 Coils Coil 193 213 - -
Pral4603g00019 856 SMART CXC_2 641 678 IPR033467 -
Pral4603g00019 856 MobiDBLite consensus disorder prediction 1 35 - -
Pral4603g00019 856 ProSiteProfiles SET domain profile. 707 822 IPR001214 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4603g00019 Pral-Chr4603 90264 98823 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4603g00019 696 825 C2H2 Transcription Factor Family AT2G23740 27.211 1.12e-09 60.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Pral4603g00019 SET 4.8e-11 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4603g00019 - K11430 gmx:100799832 1380.54