Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4602g00001 ATGGAGCAGCGAAAACTTGTGGTTTTGGGTATTCCTTGGGAAGTCGATACTGAGGGGTTGAAAGATTATATGAGCAAATTTGGTGAATTGGAAGATTGTATTGTCATGAAGGAGCGGTCAACTGGCCGGTCTCGTGGTTTTGGATATGTTACATTTGCATCAGTTGATGATGCTAAGACAGCATTATCAAGCGAACATGTTCTTGGCAATAGGATGCTGGAAGTCAAAGTGGCCACACCAAAGGAGGAGATGAGGGCACCAGTGAAGAAAGTTACCAGAATTTTTGTGGCCAGGATTCCACCATCTGTAACAGAAGCAACTTTTAGAAGTCATTTTGAGAAATATGGTGAGATAACAGATTTATACATGCCAAAGGACCAGGGCTCAAAATCACACCGGGGAATTGGTTTCATAACTTTTGCTAATGCAGAATCTGTGGAGAATTTAATGGCAGATACTCATGAACTGGGAGGTTCTGCTGTGGTTGTTGATCGGGCAACACCAAAGGAAGATGATTTCAGGCCTATTGGCAGAATGTCACAGGGAGGGTATGGTGCATACAATGCATATATATCTGCAGCAACTAGATATGCAGCCCTTGGTGCTCCTACTTTGTATGATCATCCTGGCCCAGTTTATGGAAGTAAGGGAGAACCCATTCGTGGAATGGGCAAAAAAATTTTTGTTGGCCGCCTTCCCCCTGAAGCAACAGCTGATGATCTTCGCCAGTATTTTGGAAGGTTTGGCCGTATTTTAGACGTATATGTTCCAAAGGATCCCAAGAGAGCAGGCCATAGAGGTTTTGGTTTTGTAACTTTTGCTGAAGATGGTGTAGCAGATCGTGTCTCTCGGAGGTCTCATGAGATTTGTGGACACCAGGTTGCTATAGATTCAGCCACGCCTCTTGATGATGCTGGGCCCAGTTCGAATTTTATGATGAGCAGTGTGGATACTTTTGGGGGATATGGTGGTCCTATGCGCACCTATGGGAGGATGTATGGTAGCCTGGACTTCGATGATTGGGGTTATGGAATTGGAAGTGCAAGACCATCGAGGGCAGATTGGAGGTATAGGCCATACTGA 1083 0.4497 MEQRKLVVLGIPWEVDTEGLKDYMSKFGELEDCIVMKERSTGRSRGFGYVTFASVDDAKTALSSEHVLGNRMLEVKVATPKEEMRAPVKKVTRIFVARIPPSVTEATFRSHFEKYGEITDLYMPKDQGSKSHRGIGFITFANAESVENLMADTHELGGSAVVVDRATPKEDDFRPIGRMSQGGYGAYNAYISAATRYAALGAPTLYDHPGPVYGSKGEPIRGMGKKIFVGRLPPEATADDLRQYFGRFGRILDVYVPKDPKRAGHRGFGFVTFAEDGVADRVSRRSHEICGHQVAIDSATPLDDAGPSSNFMMSSVDTFGGYGGPMRTYGRMYGSLDFDDWGYGIGSARPSRADWRYRPY 360
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4602g00001 360 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 92 168 IPR000504 GO:0003723
Pral4602g00001 360 Gene3D - 223 305 IPR012677 -
Pral4602g00001 360 SMART rrm1_1 93 164 IPR000504 GO:0003723
Pral4602g00001 360 SMART rrm1_1 226 297 IPR000504 GO:0003723
Pral4602g00001 360 SMART rrm1_1 5 76 IPR000504 GO:0003723
Pral4602g00001 360 FunFam heterogeneous nuclear ribonucleoprotein 1 2 83 - -
Pral4602g00001 360 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 6 65 IPR000504 GO:0003723
Pral4602g00001 360 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 227 281 IPR000504 GO:0003723
Pral4602g00001 360 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 94 157 IPR000504 GO:0003723
Pral4602g00001 360 Gene3D - 86 194 IPR012677 -
Pral4602g00001 360 FunFam heterogeneous nuclear ribonucleoprotein 1 84 176 - -
Pral4602g00001 360 SUPERFAMILY RNA-binding domain, RBD 225 325 IPR035979 GO:0003676
Pral4602g00001 360 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 225 301 IPR000504 GO:0003723
Pral4602g00001 360 Gene3D - 1 85 IPR012677 -
Pral4602g00001 360 SUPERFAMILY RNA-binding domain, RBD 3 85 IPR035979 GO:0003676
Pral4602g00001 360 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 4 80 IPR000504 GO:0003723
Pral4602g00001 360 SUPERFAMILY RNA-binding domain, RBD 89 187 IPR035979 GO:0003676
Pral4602g00001 360 PANTHER RNA-BINDING PROTEIN MUSASHI HOMOLOG RBP6 224 319 - -
Pral4602g00001 360 FunFam RNA-binding family protein isoform 1 222 305 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4602g00001 Pral-Chr4602 6017 12070 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4602g00001 6 274 Eukaryotic Initiation Factors Gene Family AT2G36660 24.176 8.58e-15 73.9