Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral459g00007 ATGGAACCCCGTGTTGGCAATAAGTTTCGGCTCGGCCGCAAGATCGGCAGCGGTTCCTTTGGCGAGATCTATCTGGGTACTAATATTCAAACTAACGAAGAGGTCGCAATTAAGCTTGAAAATGTCAAGACAAAGCATCCTCAGTTGTTGTATGAGTCCAAGCTGTACAGAATTCTCCAGGGAGGAACTGGAATTCCAAATGTTAGATGGTTCGGAGTGGAGGGGGATTACAATGTGCTGGTGATAGATCTGCTTGGACCCAGTCTTGAAGATCTATTTAACTTCTGCAGTAGGAAGTTATCACTGAAGACAGTTCTCATGCTTGCTGATCAAATGATCAATCGAGTTGAGTTTGTTCATTCCAAATCATTTCTACATCGGGACATCAAACCAGATAATTTTCTTATGGGCTTAGGAAGGCGTGCAAACCAGGTTTATATTATTGACTTTGGTTTGGCCAAGAAATATAGAGATAGTTCAACTCATCAACACATTCCTTACAGGGAAAATAAGAATTTGACAGGAACTGCTAGATACGCTAGCATGAACACTCATCTTGGCATTGAGCAAAGTCGAAGAGACGATTTAGAGTCTCTTGGTTATGTCCTCATGTACTTTCTGAGAGGAAGTCTTCCTTGGCAGGGGCTTAAAGCTGGCACCAAGAAGCAGAAGTATGAGAAAATCAGTGAAAAGAAGGTTTCTACCTCAATCGAGGCACTGTGCCGAGGTTATCCAACAGAATTTGCATCTTATTTCCACTACTGCCGATCATTAAGGTTTGATGATAAGCCAGATTATGCTTACCTGAAAAGAATATTTCGTGACCTCTTTATTCGTGAAGGCTTTCAGTTTGACTATGTTTTTGACTGGACTATCTTGAAGTATCAGCAATCACAGCTGGCTACTCCTCCTGCACGGGGCCTTGGCCCAAGTGCTGGAACTAGTTCTGGAATGCCTCCTGTTGTGGCTAGTGCCGATAGGCAGACAGGAGGGGATGAAGGGCGAACTCCTGGTCTTGTTTCAATGGATTCTGTGAGGCGAAGAATGTCAGGTCCCATATTAAATTCTTCTCCAAGTAACAATATTTTGGGCCAGTCAAGTGGGTCATCTCGGCGAGTTGCTGGCCGTGATGCATTTGTTGGCGGGGAGTCAGATCCGCGTACTCGCGCTACTGAAGCTAGCCCTGGAGCTGCTCACAGAATTACTAGTGGTCACAGAAGTTCACCATTGATAGCTTCAGATGCAAAGAGAATATCTTCTGGAAGAAATGCTTCTCATGTCAAGAATTATGAATCAGCTGTCAGAGGCATCGAAAGCTTGCAATTAGAGAATGATGAGAGGGCCCATTATTAA 1353 0.4405 MEPRVGNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTKHPQLLYESKLYRILQGGTGIPNVRWFGVEGDYNVLVIDLLGPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKKYRDSSTHQHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVSTSIEALCRGYPTEFASYFHYCRSLRFDDKPDYAYLKRIFRDLFIREGFQFDYVFDWTILKYQQSQLATPPARGLGPSAGTSSGMPPVVASADRQTGGDEGRTPGLVSMDSVRRRMSGPILNSSPSNNILGQSSGSSRRVAGRDAFVGGESDPRTRATEASPGAAHRITSGHRSSPLIASDAKRISSGRNASHVKNYESAVRGIESLQLENDERAHY 450
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral459g00007 450 CDD STKc_CK1_delta_epsilon 8 282 - -
Pral459g00007 450 MobiDBLite consensus disorder prediction 303 424 - -
Pral459g00007 450 Pfam Protein kinase domain 10 227 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral459g00007 450 FunFam Putative Casein kinase I 1 85 - -
Pral459g00007 450 ProSiteProfiles Protein kinase domain profile. 9 278 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral459g00007 450 MobiDBLite consensus disorder prediction 350 372 - -
Pral459g00007 450 SMART serkin_6 9 287 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral459g00007 450 SUPERFAMILY Protein kinase-like (PK-like) 5 290 IPR011009 -
Pral459g00007 450 ProSitePatterns Protein kinases ATP-binding region signature. 15 38 IPR017441 GO:0005524
Pral459g00007 450 FunFam Casein kinase I isoform delta-like 1 308 - -
Pral459g00007 450 Gene3D Transferase(Phosphotransferase) domain 1 1 306 - -
Pral459g00007 450 ProSitePatterns Serine/Threonine protein kinases active-site signature. 124 136 IPR008271 GO:0004672|GO:0006468
Pral459g00007 450 PANTHER CASEIN KINASE-RELATED 9 391 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral459g00007 Pral-Chr459 34333 40846 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral459g00007 7 223 EF-hand Containing Proteins AT2G17890 25.778 1.96e-12 67.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CK1_CK1 Pral459g00007 Pkinase 1e-26 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral459g00007 K02218 - gmx:100785851 820.076