Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral459g00002 ATGCCCGGAGACGCCACCCACTGGGACGAAAATGCCTACAGGGAAAGCATATTGAAGGAGAGGGAGATTGAAACCGGAACTGTCTTTAGAACCGCTTGGGCTCCCACACGAAACCCTAACCCGGATGTCCTCGTTGTTGCGTCCAGTGACGGATCCATTGCCTCCTATTCTATCCCTTCTTGCATTTCCAATCTCCCGTTTGGTTTTACCAACATAAAGACACAAAAATTGTTTGCTGAACCAACTTGCTTCTTTCAAGGGCACGATGGACCTGCTTATGATGTCGAGTTTTACGGGGATGATGAAGATTCTCTGTTATTGAGTTGTGGCGATGATGGTCGGATTCGGGGATGGAGATGGAAGGAGCTTGCTGGATCAAAGGATTCATCATCTTTGCTTGGAAGTGACATCAAGCCTTTACTTGACCTAGTGAATCCTCAGCACAAAGGTCCTTGGGGTGCTCTTTCGCCTATTCCTGAGAATAATGCTATTGCTGTTGACACCAAGGGAGGATCTGTTTTCTCTGCTTCTGGTGATTCTTGTGCATATTGTTGGGATGTGGCAACTGGTAAAGTGAAAACTGTTTTCAAGGGGCACTCGGACTACTTGCATTGTTTAGTTGCCCGAAACTCAGCCAGTCAGATTATAACAGGTTCAGAGGATGGGACTGCACGAATCTGGGATTGCAAAAGTGGAAAGTGTATCAAAGTGATTGATCCTGCAAAAGATTTGAAGTCAAAAGGATTTGTTTCATGGATTAGTTCTGTCGCTTTAGATGCAAGTGAGAGCTGGTTGGCTTGTAGCTATGGTCGGAGTATATCGCTCTGGAATCTGCCTGCTTCAGAATGCATATCAAAGACTTCAACGGGTTCTTCTGTACAGGACATGTTATTTGACAACAATCAAATATTGGCAGTTGGTGCAGGTCATCTACTTAATCGATTTGACATGAATGGTGCGATCCTTTCGCAAATACAATGCGCGCCTCCATCATCTTTTTCTATCTCCTTACATCCATCAGGGGTCATGGCAGTTGGAGGTTGTGGATGTCTTGTGGATGTTATCTCCCAATTTGGAAGTCACATGTGCACATTTCGCTGCCGAAGTCTTTAA 1113 0.4519 MPGDATHWDENAYRESILKEREIETGTVFRTAWAPTRNPNPDVLVVASSDGSIASYSIPSCISNLPFGFTNIKTQKLFAEPTCFFQGHDGPAYDVEFYGDDEDSLLLSCGDDGRIRGWRWKELAGSKDSSSLLGSDIKPLLDLVNPQHKGPWGALSPIPENNAIAVDTKGGSVFSASGDSCAYCWDVATGKVKTVFKGHSDYLHCLVARNSASQIITGSEDGTARIWDCKSGKCIKVIDPAKDLKSKGFVSWISSVALDASESWLACSYGRSISLWNLPASECISKTSTGSSVQDMLFDNNQILAVGAGHLLNRFDMNGAILSQIQCAPPSSFSISLHPSGVMAVGGCGCLVDVISQFGSHMCTFRCRSL 370
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral459g00002 370 PANTHER THO COMPLEX SUBUNIT 6 HOMOLOG 2 368 IPR042626 -
Pral459g00002 370 ProSiteProfiles Trp-Asp (WD) repeats profile. 196 237 IPR001680 GO:0005515
Pral459g00002 370 SMART WD40_4 189 228 IPR001680 GO:0005515
Pral459g00002 370 SMART WD40_4 78 119 IPR001680 GO:0005515
Pral459g00002 370 SMART WD40_4 231 277 IPR001680 GO:0005515
Pral459g00002 370 SMART WD40_4 151 186 IPR001680 GO:0005515
Pral459g00002 370 SMART WD40_4 16 57 IPR001680 GO:0005515
Pral459g00002 370 ProSiteProfiles Trp-Asp (WD) repeats profile. 85 118 IPR001680 GO:0005515
Pral459g00002 370 Pfam WD domain, G-beta repeat 192 228 IPR001680 GO:0005515
Pral459g00002 370 Pfam WD domain, G-beta repeat 248 277 IPR001680 GO:0005515
Pral459g00002 370 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 196 228 - -
Pral459g00002 370 Gene3D - 6 337 IPR015943 GO:0005515
Pral459g00002 370 SUPERFAMILY WD40 repeat-like 34 356 IPR036322 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral459g00002 Pral-Chr459 2514 8365 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral459g00002 116 233 Eukaryotic Initiation Factors Gene Family AT2G46290 29.661 1.42e-06 47.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral459g00002 - - qsa:O6P43_002730 597.43