Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4599g00037 ATGATTCAGGAACTGTTGGGTGGTTCTTCTGGTTTTATATCAACTGGTGACAACAGGAAAATCTCCATTAACGCAGCTCGTGCCGTTCTTGCACCTCCCATACCATCTCCTTCTCTGCCTACTTCCGCCGCCGCAGCTGCCACCACCTCCGGTGCTGCTGCTTCTCCTGCTACCGCCACCTCGTCAAATTCCGAAAACCAGAACTTGAGGTGTCCGCGATGCGATTCGTCAAACACAAAATTTTGTTACTACAACAACTACAATCTCACCCAGCCTCGCCACTTCTGCAAGACTTGTCGCCGGTACTGGACCAAAGGAGGTGCTCTGAGAAACGTTCCCATCGGAGGTGGTTGCCGGAAAAACAAGAGCGTCAGCGCATCATCCAACTCCGTGGCGGCCAAGACGAGTGTTGCTGTGGCTAAGATGAAAACGGCTGCGTCTGAGCTTGGAAGTAGGTCAGGACTTGATGGCGGCGGCTTTGACCATCAGGAACTTCCGGCAAGCCCGATTTTGTGGGGCTCGCCGCAAAATTCTCATCTGTTGGCGTTGCTGAGAGCTAGCCAGAGCCATAACCCTAACCCTAGCCCTTGTGCAAACAATCCCATGCCTAATATTGGTGTGACTGTGAAGGAAGAAGGGAACTTGATGAGATCCCACATGGTAACTGGACCAGGGGGCTCTAGTGGCCTTCTGAATGTTCCTCCAACCTCGGGCTTTGATCCTTCCCTTGGCCTCACTAGCTCTTTCTGGAGAAACAACAATCTCGATCATCAGCCAGCAGCTCATCAACCACAAAATGGAGGATTTGTATTCGGCGAGCACCAAAACAGTGGGATCCAGGAACTCTACCAGAGGCTCAGGTCCTCATCTTCAGCCAACTATTGCAGTGACGACTCGTCATCGCTGTTTCTAAGCAACATGGCTTCTTCTTCTTTATCATCATCTTCCTCTGTAGCCATTGTAGAGTCAACTCAAGCTAATGGGAGTGGAATTGGATTGGGGTACTGGAACCAACCTCTTTTCTGGTCTGATCTTCCCACGACCAATGGTGCACATCCGTAA 1062 0.5104 MIQELLGGSSGFISTGDNRKISINAARAVLAPPIPSPSLPTSAAAAATTSGAAASPATATSSNSENQNLRCPRCDSSNTKFCYYNNYNLTQPRHFCKTCRRYWTKGGALRNVPIGGGCRKNKSVSASSNSVAAKTSVAVAKMKTAASELGSRSGLDGGGFDHQELPASPILWGSPQNSHLLALLRASQSHNPNPSPCANNPMPNIGVTVKEEGNLMRSHMVTGPGGSSGLLNVPPTSGFDPSLGLTSSFWRNNNLDHQPAAHQPQNGGFVFGEHQNSGIQELYQRLRSSSSANYCSDDSSSLFLSNMASSSLSSSSSVAIVESTQANGSGIGLGYWNQPLFWSDLPTTNGAHP 353
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4599g00037 353 Pfam Dof domain, zinc finger 67 123 IPR003851 GO:0003677|GO:0006355
Pral4599g00037 353 ProSiteProfiles Zinc finger Dof-type profile. 69 123 IPR003851 GO:0003677|GO:0006355
Pral4599g00037 353 ProSitePatterns Zinc finger Dof-type signature. 71 107 IPR003851 GO:0003677|GO:0006355
Pral4599g00037 353 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 59 269 IPR045174 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4599g00037 Pral-Chr4599 287045 288564 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4599g00037 41 175 C2C2-Dof Transcription Factor Family AT1G51700 48.889 1.06e-34 124
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Pral4599g00037 zf-Dof 2.3e-32 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4599g00037 - - vvi:100244391 323.553