Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4599g00032 ATGCCGTCAAACTCCGGCGACAATCCCCGACCATCCAAGTCTCAGGCTCCGCCACCGGAACAAGAGCATCTCCCATGTCCTCGCTGTGACTCCACCAACACCAAGTTCTGCTACTACAACAACTATAACTTCTCCCAGCCGCGCCATTTCTGCAAGGCTTGCCGACGCTACTGGACTCACGGTGGCACCCTCCGTGACATCCCCGTCGGTGGTGGCAGTCGTAAAAACGCGAAACGCTCTCGCACCGCCTCTACGGCTTCTTCCTCCGTCACGGCGACTTCTTCAGTTTCTACTCAGGACCACCCGCTTCCTACAACCCCTGTTTTTGTACCCATGTCGGCTGGCCAAGGGGGGTCCATGCCGTTTGGGGGCAACGGTGGAGTTGAGAGTGATTTGAAATCTAGTATGGGAATGTGTGGAAGCTTCACTTCTTTGCTTAACAACACCACCCAAGGGCCTGGATTTCTGGCTCTAGGCGGGTTCGGGCTCGGACTTGGCCACGGGTTTGAAGATGGTTTTGGAAATGGAAGAGGGGGTTGGGCTTTTCCTGGAGTGGTGGATGGCGCCAGCATTAACGGTGGAGTTGGGGCTTCTGGCGTCGGGAATTCATGGCAGCTAGAAGGCGGCGAAGGTGGTTTTGTTGGTGGTGCAGACTGCTTCTCTTGGCCAGGACTTGCAATTTCAACACCTGGAAATGGTCTGAAATGA 708 0.5551 MPSNSGDNPRPSKSQAPPPEQEHLPCPRCDSTNTKFCYYNNYNFSQPRHFCKACRRYWTHGGTLRDIPVGGGSRKNAKRSRTASTASSSVTATSSVSTQDHPLPTTPVFVPMSAGQGGSMPFGGNGGVESDLKSSMGMCGSFTSLLNNTTQGPGFLALGGFGLGLGHGFEDXGFGNGRGGWAFPGVVDGASINGGVGASGVGNSWQLEGGEGGFVGGADCFSWPGLAISTPGNGLK 236
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4599g00032 236 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 12 117 IPR045174 GO:0003700|GO:0006355
Pral4599g00032 236 MobiDBLite consensus disorder prediction 1 26 - -
Pral4599g00032 236 MobiDBLite consensus disorder prediction 65 127 - -
Pral4599g00032 236 Pfam Dof domain, zinc finger 22 78 IPR003851 GO:0003677|GO:0006355
Pral4599g00032 236 ProSitePatterns Zinc finger Dof-type signature. 26 62 IPR003851 GO:0003677|GO:0006355
Pral4599g00032 236 ProSiteProfiles Zinc finger Dof-type profile. 24 78 IPR003851 GO:0003677|GO:0006355
Pral4599g00032 236 MobiDBLite consensus disorder prediction 77 104 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4599g00032 Pral-Chr4599 242877 244246 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4599g00032 20 236 C2C2-Dof Transcription Factor Family AT3G50410 54.077 2.71e-62 193
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Pral4599g00032 zf-Dof 3e-33 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4599g00032 - - qsa:O6P43_033783 298.901