Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4599g00016 ATGGGAATAGCAACACCGCCAGTCCTTCCGCCGATTCTTTCTCACTCCACCAGGCCCCACCATTCCTGTTCTTCCATATTAGACTCCAATTCTATGTCCCAGGATTATCACCAAGGAATCTTCGCCTTCTCGAATGGGTTCGAGAGATCCACTCTAACTCAGCACCACCAGCAACACCAGCAGCAGCAGCAACAACAGTTAGCGCAGCAGATCCGGAGAGACAAGGTGAGGGTGCAAGGGGGGTTGGACCCGCCGCCGCCGCTAGTGGGTATAGAGGAAGAAGAATCTGGAAACCTTCCCGTGTATGAAACCGGAGGGATGTTATCTGAGATGTTCAATTTCCCTCCTCCCGGAGCCACCGCCACTGAATTGTTGGAACAACAACACCAACCAGCTGCCGCGACGGCCATGTATCGGACCTCCAGGCCGCAACCACTGGCCACTGATTGGTACAGACAAGGGATGTTAAGTGGGTTGGAAAATTCAAAGAATCAGAATAGCCGTGACAATAGTAGTCTACTAGAGCAGCATCATCATCATCATCATCCTCCTCAAATTCCAAGCATGAATGCGGACTCGGCTGCCGCCATGCAGCTTTTCCTGATGAACCCACAAACAAGATCGCCTTCTCCTACTCAGAATCCCACTCCTAATTCGACCTCTCTCCAAGGCTTCACTACTCAAGGAGGGGGTTTCGGCCAATTCACATGGGCTCCTCATACTTCTCAGCAAGGAGCACCAGCCACGGCTGCTAATCCACCTCAAATTGGAGGGGTTATGGAAGCTCAAGGTCTTTCCTTATCGTTGTCATCGTCGTTGCAACACTTGGAAGCCGCGAAAGCCGAGGAATTGAGGATGGGAGACAGTGGGTTTCTGTATTACAATCAAGGATCCGGAGGGTCTTCGTCTGCCCAGTATCCGTACAAGACATTGCATTTCCAAGGGTCCGTCGGAGCAGGTCAGAACCACCAGGGACATGTGGGGTTCGGCTCATCAATAGGGGTGGTGAATGTGCTGAGGAATTCAAAGTACGTGAAAGCCGCACAAGAATTGCTCGAAGAATTCTGCAGTGTTGGGAGAGGGCAATTCAAGAGGAATAAATTCGGCAGGCAAAACTCAAACCCTAGTTCCAATCCTCCTACCGGTGGTGGTGGTTCTTCCTCTTCATCAAAGGATCCTCCTCCTTTGTCGTCGGCTGATAGGATTGAGCATCAGAGAAGGAAGGTCAAACTTCTATCCATGCTTGACGAGGTGGATCGAAGATACAACCACTACTGCGAACAAATGCAAATGGTGGTGAACTCATTCGACATGGTAATGGGATTCGGGTCTGCAGTGCCATACACGGCCTTAGCTCAGAAGGCGATGTCGCGCCATTTCCGGTGCCTGAAGGATGCGATAACGGCGCAGCTGAAGCACAGTTGTGAGTTGCTGGGTGAGAAAGACGGAGCAGGAAGCTCAGGTTTAACCAAAGGAGAGACGCCGAGGCTGAAGCTTCTGGAACAAAGCCTGAGACAGCAGAGAGCCTTCCACCAGATGGGCATGATGGAACAGGAAGCGTGGCGACCCCAAAGAGGCCTCCCCGAGCGATCCGTCAACGTTTTGCGAGCCTGGCTCTTCGAGCATTTTCTTCATCCGTATCCAAGCGATGCAGATAAGCATCTGTTGGCTCGACAGACTGGCCTCTCGAGAAATCAGGTATCAAACTGGTTCATTAATGCCAGGGTCCGGCTGTGGAAACCTATGATAGAAGAAATGTACCAACAAGAACTTAAAGAAGTAGAAGGAGAAGAGAGAGAAGAAAGGAACCAAGGCAACAATAACAACAACGTCGCACAAACTCCAACCACAGCAGCAGCAACTTCAACAGAAGCAGCGCCACCACCATCCACAACAACAACAACCACAACACCAACAACGACACTCACAACATCAGCAGCAGGCAAAAGATCCCAAATCAATGCTTCTGATGGCGACCCTTCACTCATTGCAATCAATACCCAACCCTTCTCGGAATCCCAACCAAACCACTCTTCCTCTGCCATCACCACCGCTCCAACCGCCGAAGTTGCCGCCACTTCTGAGGTGGCGCCACCCTCGTCTCAGTGTTATGACTCAGACCTGCCCCTTCACAGATCAGTGCCTGCAGATGACACGTGTCGCCATGGCAGCCTCGTTGCAGCAGATTACGGGACCGCCTCTGCTAATTCTGACATTGGTTCTACTCTCATTAGGTTTGGGACCACCGCCGGTGATGTTTCGCTCACCCTAGGGCTACGCCACGCCGGGAACATCCCTGAGAAAGCTCCTCCTTTCTCGGTTAGAGACTTCGGAGGCATTTGA 2343 0.5173 MGIATPPVLPPILSHSTRPHHSCSSILDSNSMSQDYHQGIFAFSNGFERSTLTQHHQQHQQQQQQQLAQQIRRDKVRVQGGLDPPPPLVGIEEEESGNLPVYETGGMLSEMFNFPPPGATATELLEQQHQPAAATAMYRTSRPQPLATDWYRQGMLSGLENSKNQNSRDNSSLLEQHHHHHHPPQIPSMNADSAAAMQLFLMNPQTRSPSPTQNPTPNSTSLQGFTTQGGGFGQFTWAPHTSQQGAPATAANPPQIGGVMEAQGLSLSLSSSLQHLEAAKAEELRMGDSGFLYYNQGSGGSSSAQYPYKTLHFQGSVGAGQNHQGHVGFGSSIGVVNVLRNSKYVKAAQELLEEFCSVGRGQFKRNKFGRQNSNPSSNPPTGGGGSSSSSKDPPPLSSADRIEHQRRKVKLLSMLDEVDRRYNHYCEQMQMVVNSFDMVMGFGSAVPYTALAQKAMSRHFRCLKDAITAQLKHSCELLGEKDGAGSSGLTKGETPRLKLLEQSLRQQRAFHQMGMMEQEAWRPQRGLPERSVNVLRAWLFEHFLHPYPSDADKHLLARQTGLSRNQVSNWFINARVRLWKPMIEEMYQQELKEVEGEEREERNQGNNNNNVAQTPTTAAATSTEAAPPPSTTTTTTTPTTTLTTSAAGKRSQINASDGDPSLIAINTQPFSESQPNHSSSAITTAPTAEVAATSEVAPPSSQCYDSDLPLHRSVPADDTCRHGSLVAADYGTASANSDIGSTLIRFGTTAGDVSLTLGLRHAGNIPEKAPPFSVRDFGGI 780
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4599g00016 780 FunFam BEL1-like homeodomain protein 4 524 586 - -
Pral4599g00016 780 PANTHER HOMEOBOX PROTEIN TRANSCRIPTION FACTORS 195 606 - -
Pral4599g00016 780 SMART HOX_1 521 585 IPR001356 GO:0003677
Pral4599g00016 780 Coils Coil 584 604 - -
Pral4599g00016 780 MobiDBLite consensus disorder prediction 593 704 - -
Pral4599g00016 780 MobiDBLite consensus disorder prediction 605 701 - -
Pral4599g00016 780 MobiDBLite consensus disorder prediction 159 189 - -
Pral4599g00016 780 MobiDBLite consensus disorder prediction 51 73 - -
Pral4599g00016 780 MobiDBLite consensus disorder prediction 366 403 - -
Pral4599g00016 780 SMART prehox3 333 469 IPR006563 -
Pral4599g00016 780 Gene3D - 524 586 - -
Pral4599g00016 780 Pfam Homeobox KN domain 538 577 IPR008422 GO:0003677|GO:0006355
Pral4599g00016 780 CDD homeodomain 521 582 IPR001356 GO:0003677
Pral4599g00016 780 MobiDBLite consensus disorder prediction 1 26 - -
Pral4599g00016 780 MobiDBLite consensus disorder prediction 204 257 - -
Pral4599g00016 780 MobiDBLite consensus disorder prediction 51 72 - -
Pral4599g00016 780 MobiDBLite consensus disorder prediction 366 395 - -
Pral4599g00016 780 MobiDBLite consensus disorder prediction 204 250 - -
Pral4599g00016 780 Pfam Associated with HOX 338 468 IPR006563 -
Pral4599g00016 780 SUPERFAMILY Homeodomain-like 523 588 IPR009057 -
Pral4599g00016 780 ProSiteProfiles 'Homeobox' domain profile. 518 581 IPR001356 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4599g00016 Pral-Chr4599 96110 102692 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4599g00016 740 780 Homeobox Transcription Factor Family AT2G23760 69.048 1.94e-10 62.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-BELL Pral4599g00016 POX 3.4e-52 No_clan