Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4599g00010 ATGGAGGTAGCGGAATTAACCTCGGAACAGGTTTTGGGGAGGGATATCCCATGGGAAACCTACATGGCGACTAAGCTGATCTCAGGCACAAGCCTTCAACTCTTGAGGCGTTATGATCATCGATCGCAAAGTCACAGAGAACAGTTGCTGGATGATGATGGTCCAGCTTATATTCGTGTTTTTGTTCATGTTTTGCATGATATTTTTAAAGAGGAGACTGTAGAATATGTTTTGGCATTGGTGGATGAAATGCTAGCAGCAAACCCAAAAAGGGCTAGATTGTTTCATGATAAGTCCCTTGCTGATGTAGATACCTACGAACCTTTCTTAAGATTGCTCTGGAAAGGGAATTGGTTCATACAAGAGAAAAGTTGTAAGATCCTTGCTTCAATAGTGAGTGTCCGGCCAAAAAATCAAAATGGCATTGTTACAAATGGAGAAGCATCAAACTCAAAGAAATCACTCACTACAATTGATGATGTTTTGACGGCATTGGTGAAATGGCTTTGTGAACAGCTGAAGAAACCTTCTCATCCTAGTCGTGGCGTCCCAACTGCTGTCAATTGCCTGTCAACTTTACTCAAGGAATCCATGGTTAGATCTTCCTTTGTTAAAGCAGATGGGGTCAAGTTGCTTGTACCTTTGATTTCGCCAGCATCCACTCAACAATCAATTCAGCTTCTTTATGAAACATGCCTCTGCATCTGGCTTCTGTCCTATTATGAGCCTGCAATTGATTACTTGGCTAGTTCAGGATCCCTTCTGCGACTTATTGACGTCATAAAGAGCTCTACGAAAGAAAAGGTCGTTAGAGTTGTTGCCTTGACTTTTAAAAACTTGCTGTCAAGAGGAACATGGGGTACTCAAATGGTCGACCTTCAGCTGCCACAAGTTGTTCAGAATTTGAAAGCACAAGCGTGGAGTGATGAGGACTTGTTGGAGGCACTAAATTACCTGGAAGAAGGGCTTAGGGATAACATTAAGAAACTAAGTTCTTTTGATAAGTACAAGCAAGAAGTTCTTTATCGAAATCTGGACTGGTCTCCCATGCATAAAGATCCCATATTTTGGCGAGAAAATATTACCAACTTCGAAGAGAATGACTTTCAGATTCTAAAAGTCCTAATAAATTTGGACACGTCTGAGCAGCCGAGGACTCTCGCTGTTGCTTGCTTTGACCTTTCCCAGTTCATAAATTACCATCCTGCTGGGAGGGTCATCGTGACGAACCTTAAAGCCAAAGAACGAGTCATGAAATTGATGAATCATGAGAACGCCGAGGTCACTAAAAATGCCCTGTTATGCATCCAAAGGCTTTTCTTAGGTGCCAAGTTTGCAAGCTTTTTGCAAGCCTAG 1356 0.4204 MEVAELTSEQVLGRDIPWETYMATKLISGTSLQLLRRYDHRSQSHREQLLDDDGPAYIRVFVHVLHDIFKEETVEYVLALVDEMLAANPKRARLFHDKSLADVDTYEPFLRLLWKGNWFIQEKSCKILASIVSVRPKNQNGIVTNGEASNSKKSLTTIDDVLTALVKWLCEQLKKPSHPSRGVPTAVNCLSTLLKESMVRSSFVKADGVKLLVPLISPASTQQSIQLLYETCLCIWLLSYYEPAIDYLASSGSLLRLIDVIKSSTKEKVVRVVALTFKNLLSRGTWGTQMVDLQLPQVVQNLKAQAWSDEDLLEALNYLEEGLRDNIKKLSSFDKYKQEVLYRNLDWSPMHKDPIFWRENITNFEENDFQILKVLITXLDTSEQPRTLAVACFDLSQFINYHPAGRVIVTNLKAKERVMKLMNHENAEVTKNALLCIQRLFLGAKFASFLQA 452
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4599g00010 452 SUPERFAMILY ARM repeat 9 442 IPR016024 -
Pral4599g00010 452 Gene3D - 343 444 IPR038497 -
Pral4599g00010 452 Gene3D - 3 331 IPR011989 -
Pral4599g00010 452 PANTHER V-TYPE PROTON ATPASE SUBUNIT H 4 451 IPR004908 GO:0000221|GO:0046961|GO:1902600
Pral4599g00010 452 FunFam V-type proton ATPase subunit H 343 444 - -
Pral4599g00010 452 Pfam V-ATPase subunit H 5 323 IPR004908 GO:0000221|GO:0046961|GO:1902600
Pral4599g00010 452 SMART arm_5 196 240 IPR000225 GO:0005515
Pral4599g00010 452 SMART arm_5 402 442 IPR000225 GO:0005515
Pral4599g00010 452 SMART arm_5 241 282 IPR000225 GO:0005515
Pral4599g00010 452 Pfam V-ATPase subunit H 329 441 IPR011987 GO:0000221|GO:1902600
Pral4599g00010 452 PIRSF V-ATP_synth_H 1 450 IPR004908 GO:0000221|GO:0046961|GO:1902600
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4599g00010 Pral-Chr4599 53783 59381 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4599g00010 1 452 Primary Pumps ATPases(2) AT3G42050 74.779 0.0 706
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4599g00010 K02144 - gmx:100788723 777.319