Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4597g00029 ATGTCTTCCTCGTCCCCTGACACTGCTCCATCTTCAGATTCTGATTATAATGATAATGGAGATTCATCGCAAAGCCCTCCACCACCCCCACCACCAGACCAGCAGAGCGCAGATCCTAATGACGATCCATTTGCAACTTCACCGCCACCACCTAACCAGAACTCTTCGGGTTCCCACGATAATAGTTCCGGTTCTGGTTCGTCGAACCAAGGCTCTTCTGGTGGCAAATCTCAATCTCCATCTTCAAGTCCTTCATCGAACAATAATGGTAAATCGTCGAATTCCAGTTCATCCTCCTCTGAATCGTCACCGTCAACGCCTAATTTAACACCAAAATCTTCCGGCGGGAAGTCACCTCCGGCAATATCCGAATCCAGCGAAAAGAGCAGCGGCGGCAAGAGTGACGACAGTAGAGCAATCATAGGAGCCGCCGTTGGAGTAGGGTTTGTTCTTCTGATAATGATCATCGTCTGTATCATTTGCTGCAGAAGGAAGAAGCGAAAGCATAGGTATTACTATAGCGACGAAGGCAAACCCGGCAAATCTGGTAGTGGTTATTACAACAGGGGACAGAACCCAAATAACTGGCACCCTGGTGGGAATGACCATGTTGTGAGGATGCAGCAATCACCAGGCATGGGTATGGGTATGGGTATGGGTATGGGCATGGCTCCGGACAGTGGTGGGTGGGGCCCAGTTCCTCCACCTCCTCCACCACACAGCACCGACATGAGTTCCAATTACTCACTGGGGCCGCCACCTCTGCCTCCGCCATCCCCAGGGCTGACTTTTGGGCTGAATTGTGGCACCTTCTCTTTTGAAGACTTGGCTGCCGCGACGGAGGGCTTTGCTGATAAGAATCTGATAGGACAAGGAGGTTTTGGTTACGTGCATAAGGGTGTTTTGCCTAATGGAAAAGAAGTGGCCGTGAAGAGCCTCAAAGCTGGCAGTGGCCAAGGAGAGCGTGAATTCCAAGCTGAGATCGAAATCATTAGTCGTGTTCATCATCGCCATCTCGTGTCCCTCCAGGGCTACTGTATTGCTGGTGGACAACGAATGTTGGTTTATGAATTTGTTCCCAATGAAACTCTTGAGCATCACCTTCATGGAAAGGGTTTGCCTACCATGAGTTGGCCTGACAGAATGAGAATTGCAGTAGGATCTGCCAAAGGGCTTGCATACCTTCACGAAGACTGTCACCCTCGAATTATCCACCGTGATATCAAATCTGCCAATGTCCTCCTTGACGATAGCTTCGAAGCTAAGGTGGCTGATTTCGGATTGGCTAAGTTGACTACTGATAACAATACTCATGTCTCAACTCGAGTCATGGGAACATTCGGGTACTTGGCTCCGGAATATGCGTCGAGTGGAAAATTGACTGAGAAGTCAGACGTGTTCTCTTTCGGAGTGATGTTACTAGAACTCATAACGGGGAAGCGACCTATAGATATCCAAAACATGATGGACGATAGTTTAGTAGACTGGGCTCGACCACTGCTGGCAAAAGGGCTGGAGGATGGAAACTTTGAGGAGCTGGTGGATCCGTTCTTGGAAGGCAATTACAATAACCAGGAATTGTCTCGTATTGCTGCCTGTGCTTCTGCCAGCATTCGTCATTCCGGCAAGAAACGTCCTAAAATGAGCCAGATCGTAAGAGCACTGGAAGGAGACGTGTCATTGGAAGACTTGAACGATGCAAAGGCCGGGCATGGCCACCTTCTGGCATCTTCATCCAGCTCAGAGTACGATTCGAGTGCGTATCAGGCTGATATGAAGAGGTTCAGACAGATAGCTCTGGCCAGCCAGGAATTCGGAAGCAGTGAATCAAGTGGTGAGATTCCAAAGCAACGTCTTTAG 1860 0.4935 MSSSSPDTAPSSDSDYNDNGDSSQSPPPPPPPDQQSADPNDDPFATSPPPPNQNSSGSHDNSSGSGSSNQGSSGGKSQSPSSSPSSNNNGKSSNSSSSSSESSPSTPNLTPKSSGGKSPPAISESSEKSSGGKSDDSRAIIGAAVGVGFVLLIMIIVCIICCRRKKRKHRYYYSDEGKPGKSGSGYYNRGQNPNNWHPGGNDHVVRMQQSPGMGMGMGMGMGMAPDSGGWGPVPPPPPPHSTDMSSNYSLGPPPLPPPSPGLTFGLNCGTFSFEDLAAATEGFADKNLIGQGGFGYVHKGVLPNGKEVAVKSLKAGSGQGEREFQAEIEIISRVHHRHLVSLQGYCIAGGQRMLVYEFVPNETLEHHLHGKGLPTMSWPDRMRIAVGSAKGLAYLHEDCHPRIIHRDIKSANVLLDDSFEAKVADFGLAKLTTDNNTHVSTRVMGTFGYLAPEYASSGKLTEKSDVFSFGVMLLELITGKRPIDIQNMMDDSLVDWARPLLAKGLEDGNFEELVDPFLEGNYNNQELSRIAACASASIRHSGKKRPKMSQIVRALEGDVSLEDLNDAKAGHGHLLASSSSSEYDSSAYQADMKRFRQIALASQEFGSSESSGEIPKQRL 619
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4597g00029 619 MobiDBLite consensus disorder prediction 23 50 - -
Pral4597g00029 619 MobiDBLite consensus disorder prediction 1 136 - -
Pral4597g00029 619 MobiDBLite consensus disorder prediction 173 256 - -
Pral4597g00029 619 Gene3D Phosphorylase Kinase; domain 1 262 358 - -
Pral4597g00029 619 FunFam Proline-rich receptor-like protein kinase PERK1 359 566 - -
Pral4597g00029 619 Gene3D Transferase(Phosphotransferase) domain 1 359 570 - -
Pral4597g00029 619 MobiDBLite consensus disorder prediction 51 128 - -
Pral4597g00029 619 ProSiteProfiles Protein kinase domain profile. 283 561 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4597g00029 619 MobiDBLite consensus disorder prediction 1 22 - -
Pral4597g00029 619 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4 146 599 IPR047117 -
Pral4597g00029 619 ProSitePatterns Protein kinases ATP-binding region signature. 289 311 IPR017441 GO:0005524
Pral4597g00029 619 FunFam proline-rich receptor-like protein kinase PERK1 261 358 - -
Pral4597g00029 619 SUPERFAMILY Protein kinase-like (PK-like) 258 555 IPR011009 -
Pral4597g00029 619 SMART serkin_6 283 518 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4597g00029 619 Pfam Protein tyrosine and serine/threonine kinase 287 553 IPR001245 GO:0004672|GO:0006468
Pral4597g00029 619 ProSitePatterns Serine/Threonine protein kinases active-site signature. 403 415 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4597g00029 Pral-Chr4597 155178 158845 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4597g00029 138 612 Trihelix Transcription Factor Family AT1G70460 50.830 4.68e-152 453
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-1 Pral4597g00029 PK_Tyr_Ser-Thr 2.1e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4597g00029 - - gmx:100777163 630.172