Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4596g00003 ATGGCGCATCACAGGATGCTTTCTGTAAGGTTTGGAGAAGAAATCAAATCTTCTTCGAGAATGAAGCATGATGGGATTAGAAATGGCACTCTACGTGGTAACAAGAAGCAGGATCCAACATGGGAGGAAAAGCATATAACTCCTTCCAAAGGAAGAATCAACGAAATGTTTGCAGAGACAAGACTTTATGAGAGTCCCCAAGGGCATATTTCATTAACGGGTTCTGCAGGGTCGATTCAGTCTGGTCCTGTTTTCTTTTCGAATCGAACCCGCAAGAGTATCCAGAGCACATCATCATCGCCGTCATCATTTAGATCTAGTAGAACTTCACTTTCCAGCTCCTCTGGAGGGAAAATAACGGGGAAGAAGAAAAAGGAGGAGAAACGAGCATTGTTTTCTTGCATGGGACGAAAATCATGCAAGAACTCAAGAAGATCACCGGAACGTGCAAGAGTTAATGAAGCGTTGATCATCGAGAGAGCGTGCGTGGTGGAGAGTCTGCCACAATTCTGGGCAGATAAGTACCGACCTGCTTCCCTGAATGACTTCGTTTGCCACAAACAAGAAGCTCAACTTCTCAAGCAATTTGTGTCTCTTGATGAAATTCCACACGCTCTGCTAAAAGGTCCCCCCGGTACAGGGAAAAGAGCCTTAGCAATGGCTCTTCTGCGAGAAATATACGGCGAGGAGTGTTGGAACTTATCCCACGATATAAGATATTTCCCCTTTCAGGAAGGTAGGCCTACGAAAATAAGTGTTCCAATAACGTTCAGTCGTCATCACGTGGAACTAAACGTAAATTTGGAGCGGAATGCTAAGCATGCTTTGATTGGGTTAGTGAAGGAAATGAACTGTATCTATGCAGTAACACCCCAAGATGCCAATCTCAATATCAAGTCAGATTGTCAAGTGGTAGTTCTCTATGAGGTTGACAAGGCAGGACAGGACATCCAGCACATAATCTCATGGATTATAGATTGCCACTCCCAAATATGCAAACTAATACTCTGCTGCCAAGATGATGTTGACATTCCTGACTCTGTGAGGAACCTGCTCAAAGTGATTGAGGTTCGTCCACCTACTATTACTCAGATTGTAGAGGTTCTGTTTGAGATAGCAAGGAAAGAGGATATTCATCTATCAATGAATTTTGCTGCTATGATTGCAGCAAAATCTAATCAGAATCTCAGGCAAGCTATCATGGCTCTTGAGGCATGCAAAGCATTCGAGTAA 1233 0.4355 MAHHRMLSVRFGEEIKSSSRMKHDGIRNGTLRGNKKQDPTWEEKHITPSKGRINEMFAETRLYESPQGHISLTGSAGSIQSGPVFFSNRTRKSIQSTSSSPSSFRSSRTSLSSSSGGKITGKKKKEEKRALFSCMGRKSCKNSRRSPERARVNEALIIERACVVESLPQFWADKYRPASLNDFVCHKQEAQLLKQFVSLDEIPHALLKGPPGTGKRALAMALLREIYGEECWNLSHDIRYFPFQEGRPTKISVPITFSRHHVELNVNLERNAKHALIGLVKEMNCIYAVTPQDANLNIKSDCQVVVLYEVDKAGQDIQHIISWIIDCHSQICKLILCCQDDVDIPDSVRNLLKVIEVRPPTITQIVEVLFEIARKEDIHLSMNFAAMIAAKSNQNLRQAIMALEACKAFE 410
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4596g00003 410 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 165 405 IPR027417 -
Pral4596g00003 410 MobiDBLite consensus disorder prediction 19 44 - -
Pral4596g00003 410 PANTHER REPLICATION FACTOR C / DNA POLYMERASE III GAMMA-TAU SUBUNIT 168 408 - -
Pral4596g00003 410 MobiDBLite consensus disorder prediction 90 118 - -
Pral4596g00003 410 Gene3D - 363 409 - -
Pral4596g00003 410 Gene3D - 169 360 IPR027417 -
Pral4596g00003 410 MobiDBLite consensus disorder prediction 90 126 - -
Pral4596g00003 410 FunFam replication factor C subunit 3 361 410 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4596g00003 Pral-Chr4596 9673 11753 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4596g00003 170 408 Core DNA Replication Machinery Family AT5G27740 34.440 1.29e-39 143
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4596g00003 K10756 - tcc:18610901 369.392