Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4592g00019 ATGGCGAACATGAATAATCTTAATGACGAGGAGAATAATGAACATGGGTTACCTTCGATTATCGGGGTTGGCGAAGGAGGTGGTGGTGGTGGTGAGGGTGCCGGTGGGGCAGCGGCAGCAGCGGAGGAGGTTGTCCTCAAGAAGGGACCATGGACGGCGGCCGAGGATGCGGTGCTTATTGATTATGTGACGAAGCATGGTGAAGGGAATTGGAATGCGGTGCAGAGGAATACGGGGTTGGCTCGCTGTGGCAAGAGCTGTAGATTGAGATGGACGAACCATTTGCGTCCAAATCTGAAGAAAGGTGCCTTTTCTCCTGAGGAAGAGAAGCTCATTCTGGAGCTTCATGCTCAGTTCGGCAACAAATGGGCTCGAATGGCCACTCTTTTACCTGGGCGAACAGACAATGAAATCAAGAACTACTGGAATACTAGGGTGAAGCGCCGGCAAAGACAAGGCTTGCCACTGTATTCCAGTGATTCTGATCAGCCAACCACATCTGCAGCACCGGCCACCTCAGGTACAAGACCGGTCACTGGATCCACTGGTGCAAAATTGGATTATTGTAGTCAGAACCGCTATCCTCTGTCTTCATTCCATGCAGGATCTTCTTATTCCGCTCATGCCCCTTTCTTTGACCCCAATTCTCTTTCTTCTTCTTCCTCCTCCTTCCTTACCTTCCCTTCTCAACAGCCTACGTCTGCATTACACATCTCTCCACTTCATTCAAAGCGTTGCCGTACCACTTTTTCCCTCCCAGATGCACCTTTGACCACCCCCTTGGTGGATTTTGATGGACTCAACTTTCCAGCCCAATTTAATTCAAGTTCTTGTCAAATCTTCCAGACTCCATTGGAGTTATCATCTTCAGTTCCTGGGGTTCTAAGTCCATCTTCCATTTTGTCTACCAAAATGGAGCTCCCTTCAAACCAATTTTCCCCATCCAATAATGACCTACTGGGGGATCTTCTTCTGGAAGCTCAAGTGTTGGTTTCTGGCCAGAATTCGAAGAAACGAACCTATTCAAGTTTCAGTGAAGGAAATGGTTTCTTAGATGGACATATTGGCTTGGACAATATGCCTCATAGCTCTGTTTACTGGTCTTCAGGACTGAAACCAAGGTCAGAGCCATCAGACATGAATGAGCTTTCCACACTGATCTCTGGAATGCCTTCAACCATTCAGGCTTCTGAATGGCACAATGACATTGCTGCACAAACCTCCAATGTTCAATCTTCTGGTGATATTGTGGGTGATGATAATTTTGAGCTTGATTTCAAGCCTATTGCTTCGTTGATTCCTGTCAACAACGCCACAACAAACCCTAACGAAAACCCTGGCTTCTTCTCATGGGACACCTTACCTGGACTCTGCTGA 1377 0.4749 MANMNNLNDEENNEHGLPSIIGVGEGGGGGGEGAGGAAAAAEEVVLKKGPWTAAEDAVLIDYVTKHGEGNWNAVQRNTGLARCGKSCRLRWTNHLRPNLKKGAFSPEEEKLILELHAQFGNKWARMATLLPGRTDNEIKNYWNTRVKRRQRQGLPLYSSDSDQPTTSAAPATSGTRPVTGSTGAKLDYCSQNRYPLSSFHAGSSYSAHAPFFDPNSLSSSSSSFLTFPSQQPTSALHISPLHSKRCRTTFSLPDAPLTTPLVDFDGLNFPAQFNSSSCQIFQTPLELSSSVPGVLSPSSILSTKMELPSNQFSPSNNDLLGDLLLEAQVLVSGQNSKKRTYSSFSEGNGFLDGHIGLDNMPHSSVYWSSGLKPRSEPSDMNELSTLISGMPSTIQASEWHNDIAAQTSNVQSSGDIVGDDNFELDFKPIASLIPVNNATTNPNENPGFFSWDTLPGLC 458
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4592g00019 458 MobiDBLite consensus disorder prediction 152 182 - -
Pral4592g00019 458 CDD SANT 103 144 IPR001005 -
Pral4592g00019 458 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 46 95 IPR017930 -
Pral4592g00019 458 Gene3D - 47 100 - -
Pral4592g00019 458 FunFam MYB-related transcription factor 47 100 - -
Pral4592g00019 458 SUPERFAMILY Homeodomain-like 47 142 IPR009057 -
Pral4592g00019 458 ProSiteProfiles Myb-like domain profile. 43 95 IPR001005 -
Pral4592g00019 458 PANTHER TRANSCRIPTION FACTOR MYB33-RELATED 30 406 - -
Pral4592g00019 458 SMART sant 100 148 IPR001005 -
Pral4592g00019 458 SMART sant 47 97 IPR001005 -
Pral4592g00019 458 Pfam Myb-like DNA-binding domain 48 95 IPR001005 -
Pral4592g00019 458 Pfam Myb-like DNA-binding domain 101 144 IPR001005 -
Pral4592g00019 458 CDD SANT 50 95 IPR001005 -
Pral4592g00019 458 Gene3D - 103 149 - -
Pral4592g00019 458 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 96 150 IPR017930 -
Pral4592g00019 458 MobiDBLite consensus disorder prediction 154 182 - -
Pral4592g00019 458 ProSiteProfiles Myb-like domain profile. 96 146 IPR001005 -
Pral4592g00019 458 FunFam Transcription factor GAMYB 103 149 - -
Pral4592g00019 458 MobiDBLite consensus disorder prediction 1 35 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4592g00019 Pral-Chr4592 107060 109629 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4592g00019 26 458 MYB Transcription Factor Family AT4G26930 36.695 3.28e-67 218
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Pral4592g00019 Myb_DNA-binding 1.5e-12 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4592g00019 - - pcin:129317915 751.895