Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4592g00012 ATGGGTCTGTGTTTGAGTAAAAACAAAGATTCAGAGCGAGACTATAATGGATACAGATCAGTTGGGGGAACCGGAGCCCAGAATTACAAAACCCATGAACCCCATGGAAATCAACCGAAACCCACTTCTCATCAGCCGTATCAATTACCCGAAAAGCCCTCTTCTAGGGCTTCCCTATATCCTAGTAAGACCGGCCACAGTACGATTCTGGGGAAGCAATTTGAAGATGTGAAGCAATTTTACAGGCTCGGGAAAGAACTGGGTAGGGGTCAATTTGGTGTGACCTATCTCTGCACTGAGATTTCAACGGGTAGATCGTACGCTTGCAAGTCAATCTCGAAGAGGAAGCTTACAAGCAGAGCTGATAAGGAGGATATGAAGAGGGAGATTCAGATTATGCAGCATTTGAGTGGGCAGCCTAATATTGTGGAGTTCAAAGGTGCTTATGAAGATAGTCAGTCTGTTCATCTTGTGATGGAGCTGTGTGCAGGGGGTGAGCTCTTTGATCGGATTATTGCCAAGGGACATTACAGTGAAAGAGCTGCCGCTTCTATATGTAGACAGATTGTTAATGTTGTTCATATCTGCCACTTTATGGGTGTGATGCATAGAGATCTCAAGCCTGAGAATTTCTTGTTGTCCAGTAAGGATGAAAAGGCACTTCTCAAAGCCACAGATTTCGGTTTGTCCGTTTTTATTGAGGAAGGTAAAATTTTCTTCCCCATCACTGTTACTTTTTTCCCCCCCGATAAGATGATTTATCTCTTCATAAATTACTTCTCCTCAGGAAAGGTTTATAAGGATATAGTTGGGAGTGCCTATTATGTTGCTCCTGAAGTCCTACGGCGCAAATACGGGAAGGAAATTGACATATGGAGTGCAGGAGTGATATTGTATATCTTACTCAGTGGTGTACCTCCTTTTTGGGCTGAGACGGAAAAGGGAATATTTGATGCCATTTTGGAAGGTCATATTGATTTTGAAAGTCAACCATGGCCAAGCATATCAAACAGTGCCAAGGATCTTGTTCGTAAGATGCTGACTCAAGACCCAAAAAAGCGCATCACTTCTGCTCAGGTTCTAGAGCATCCATGGATTAGAGAAGATGGAAATGCATCTGATAAGCCGATAGATAGTGCAGTCCTTTCCAGAATGAAGCAATTCAGAGCAATGAATAAGCTAAAGAAACTTGCCCTGAAGGTCATTGCGGAAAATCTCTCTGAAGAAGAGATCCAAGGGTTGAAGGCAATGTTTACAAATATGGATACAGACAACAGCGGTACGATCACCTATGAGGAACTAAAGGAGGGATTGCAGAGACTTGGCTCAAAGCTCACAGAGGCTGAAGTGAAGCAGCTTATGGAAGCTGCTGATGTAGATGGAAACGGCACCATTGACTACATAGAGTTTATCACTGCCACAATGCATAGACATAGATTAGAAAGAGACGAACATCTCTACAAAGCCTTCCAGTATTTTGATAAAGATCACAGTGGATTCATAACAAGGGATGAACTTGAAACAGCCATGAAAGAATATGGCATGGGCGATGAAGGCACAATCAAGGAAATCATATCAGAAGTTGACACAGATAATGATGGTAGGATCAATTATGAAGAATTCTGTGCAATGATGAGGAGTGGAACCCCGCAAGGCAAGCTATTCTGA 1668 0.4275 MGLCLSKNKDSERDYNGYRSVGGTGAQNYKTHEPHGNQPKPTSHQPYQLPEKPSSRASLYPSKTGHSTILGKQFEDVKQFYRLGKELGRGQFGVTYLCTEISTGRSYACKSISKRKLTSRADKEDMKREIQIMQHLSGQPNIVEFKGAYEDSQSVHLVMELCAGGELFDRIIAKGHYSERAAASICRQIVNVVHICHFMGVMHRDLKPENFLLSSKDEKALLKATDFGLSVFIEEGKIFFPITVTFFPPDKMIYLFINYFSSGKVYKDIVGSAYYVAPEVLRRKYGKEIDIWSAGVILYILLSGVPPFWAETEKGIFDAILEGHIDFESQPWPSISNSAKDLVRKMLTQDPKKRITSAQVLEHPWIREDGNASDKPIDSAVLSRMKQFRAMNKLKKLALKVIAENLSEEEIQGLKAMFTNMDTDNSGTITYEELKEGLQRLGSKLTEAEVKQLMEAADVDGNGTIDYIEFITATMHRHRLERDEHLYKAFQYFDKDHSGFITRDELETAMKEYGMGDEGTIKEIISEVDTDNDGRINYEEFCAMMRSGTPQGKLF 555
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4592g00012 555 Gene3D Transferase(Phosphotransferase) domain 1 167 374 - -
Pral4592g00012 555 Gene3D - 375 548 - -
Pral4592g00012 555 FunFam Calcium-dependent protein kinase 5 167 374 - -
Pral4592g00012 555 FunFam Calcium-dependent protein kinase 1 374 549 - -
Pral4592g00012 555 Pfam Protein kinase domain 81 366 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4592g00012 555 ProSitePatterns Protein kinases ATP-binding region signature. 87 110 IPR017441 GO:0005524
Pral4592g00012 555 Gene3D Phosphorylase Kinase; domain 1 83 166 - -
Pral4592g00012 555 CDD EFh 488 546 IPR002048 GO:0005509
Pral4592g00012 555 PANTHER SERINE/THREONINE-PROTEIN KINASE 75 541 - -
Pral4592g00012 555 ProSitePatterns EF-hand calcium-binding domain. 422 434 IPR018247 -
Pral4592g00012 555 ProSiteProfiles EF-hand calcium-binding domain profile. 521 551 IPR002048 GO:0005509
Pral4592g00012 555 SMART efh_1 520 548 IPR002048 GO:0005509
Pral4592g00012 555 SMART efh_1 449 477 IPR002048 GO:0005509
Pral4592g00012 555 SMART efh_1 413 441 IPR002048 GO:0005509
Pral4592g00012 555 SMART efh_1 485 513 IPR002048 GO:0005509
Pral4592g00012 555 SUPERFAMILY Protein kinase-like (PK-like) 80 373 IPR011009 -
Pral4592g00012 555 ProSitePatterns EF-hand calcium-binding domain. 458 470 IPR018247 -
Pral4592g00012 555 ProSiteProfiles EF-hand calcium-binding domain profile. 445 480 IPR002048 GO:0005509
Pral4592g00012 555 ProSiteProfiles EF-hand calcium-binding domain profile. 409 444 IPR002048 GO:0005509
Pral4592g00012 555 FunFam Calcium-dependent protein kinase 1 83 166 - -
Pral4592g00012 555 Coils Coil 431 451 - -
Pral4592g00012 555 MobiDBLite consensus disorder prediction 1 64 - -
Pral4592g00012 555 CDD STKc_CAMK 80 365 - -
Pral4592g00012 555 SMART serkin_6 81 366 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4592g00012 555 ProSitePatterns EF-hand calcium-binding domain. 529 541 IPR018247 -
Pral4592g00012 555 ProSiteProfiles Protein kinase domain profile. 81 366 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4592g00012 555 ProSitePatterns EF-hand calcium-binding domain. 494 506 IPR018247 -
Pral4592g00012 555 MobiDBLite consensus disorder prediction 21 64 - -
Pral4592g00012 555 ProSiteProfiles EF-hand calcium-binding domain profile. 481 516 IPR002048 GO:0005509
Pral4592g00012 555 SUPERFAMILY EF-hand 405 545 IPR011992 -
Pral4592g00012 555 Pfam EF-hand domain pair 414 474 IPR002048 GO:0005509
Pral4592g00012 555 Pfam EF-hand domain pair 484 546 IPR002048 GO:0005509
Pral4592g00012 555 CDD EFh 414 473 IPR002048 GO:0005509
Pral4592g00012 555 ProSitePatterns Serine/Threonine protein kinases active-site signature. 201 213 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4592g00012 Pral-Chr4592 74054 78226 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4592g00012 1 551 EF-hand Containing Proteins AT3G20410 73.462 0.0 836
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Pral4592g00012 Pkinase 2.1e-72 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4592g00012 K13412 - qsa:O6P43_013720 887.1