Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4592g00011 ATGAAGATGGAAGCTAAGGAGATTGTTTCAGTTTGCGTTGGAATGTCCATGAGAGTTCTGGACCGACTCGTTTTTGCTGCATTCACCTGCATTCTCGCTCTAGGAGGGTCAATAATGGGGATGATAGTGGGAGGGATGAAGGGACAGAGATCAGAAGCAGGAATACTTGATGGAGCTGGGAAAGGAGCAGTTTCAGGAGCCATTGCTGCTGTCGAATTGCTTGATTTTGCCGTTCACCATCATCATCAGCCTATGTCTAAGGTTGCCTTATTAAGCAGTTTATTCAATGGGAAGGTCCTACTGGAATGGGTATATCCAGCCTATCAATGGCATATTGGGATACCAGAAACAATCTACAGAGAAGTATCACATATTTATGATATGAGAGGAGCGCCAGGATTGTCCCAGAAATTGATTCAAAGCCTCCCTTTGCATCAATTCAACTCTACAACTATGCCAAGTTTATACAATGAATCCTGTTGCTCCATTTGCTTCCAGGAGTTTGAAGATGGAGATGTGATAAGGATGCTTCCAAAATGTGACCATATGTTTCACTTTCACTGTATAGATAAGTGGCTCATCCGACAAGGATCTTGCCCTTTGTGTAGAACTTATGTTCTTGAGGATCTTTTTGATATTTAG 642 0.4237 MKMEAKEIVSVCVGMSMRVLDRLVFAAFTCILALGGSIMGMIVGGMKGQRSEAGILDGAGKGAVSGAIAAVELLDFAVHHHHQPMSKVALLSSLFNGKVLLEWVYPAYQWHIGIPETIYREVSHIYDMRGAPGLSQKLIQSLPLHQFNSTTMPSLYNESCCSICFQEFEDGDVIRMLPKCDHMFHFHCIDKWLIRQGSCPLCRTYVLEDLFDI 213
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4592g00011 213 PANTHER NEP1-INTERACTING PROTEIN-LIKE 2 7 204 IPR044523 -
Pral4592g00011 213 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 121 207 IPR013083 -
Pral4592g00011 213 Pfam Ring finger domain 161 203 IPR001841 -
Pral4592g00011 213 ProSiteProfiles Zinc finger RING-type profile. 161 203 IPR001841 -
Pral4592g00011 213 SUPERFAMILY RING/U-box 155 209 - -
Pral4592g00011 213 SMART ring_2 161 202 IPR001841 -
Pral4592g00011 213 CDD RING-H2_EL5-like 160 203 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4592g00011 Pral-Chr4592 65555 67704 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4592g00011 19 206 C3H Transcription Factor Family AT5G66070 33.166 8.23e-36 124
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4592g00011 - K19041 gmx:100305612 249.21