Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4591g00013 ATGAGTGTGGTGGGGTTTGACATTGGAAATGAGAACTGTGTCATTGCTGTAGTGAAGCAACGTGGGATTGATGTTTTACTGAATGATGAATCCAAACGCGAAACCCCTTCAGTGGTCTGCTTTGGGGAGAAGCAAAGATTTATGGGGTCAGCTGGTGCTGCATCTGCTATGATGAACATCAAGTCTACAATATCTCAAGTGAAGAGGCTGATAGGGAGAAAATATGCAGACCCTGATGTGCAAAATGAGCTGAAAATGCTCCCGGTTGAAACTTCTGAAGGCCAAGATGGTGGCATTTTGGTTCACTTGAAATATCTCAAGGAGACTCATACATTTACACCAGTTCAAATTTTAGCAATGCTCCTTGCTCATTTGAAAACTCTAACTGAAAAGGATTTGGAAATGCCAATTTCAGACTGTGTTATTGGGATCCCATCATACTTTTCAGACTTGCAGAGACGGGCATATCTTGACGCAGCAAGGGTTGCTGGTTTGAAGCCTGTGAGATTGATTCATGATTGTACTGCAACTGCTCTTGGTTATGGAATTTACAAAACAGATTTTCCTGGAACAGGTCCAACCTATGTGGCATTTGTGGACATTGGTCACTGTGATACTCAGGTCTCCATTGCAGCATTTGAGTCTGGGAAAATGAAGATACTTTCCCACGCTTTTGATAGGGATTTAGGGGGAAGAGATTTTGATGAGGTTCTCTTTAGTCATTTTGCAGCACAGTTTAAGGAACAGTACAGCATTGACGTGTACTCTAATGTCAAGGCATGTATCAGGTTGCGCACTGCATGTGAGAAGTTGAAGAAAGTTTTGAGTGCAAATAATGAGGCAGCTTTAAACATTGAGTGCTTGATGGATGAGAAAGATGTCAAGGGCTTCATCAAGAGGGAGGAGTTCGAGAAGTTGGCATCAGGGTTATTGGAGAAGATTTGTGTTCCATGCCATAAAGCATTAATTGATGCAAGACTAACTGCAGATAAGATCGATTCTGTAGAGCTAGTTGGCTCAGGTTCTAGGGTTCCTGCCATAGCTAGATTATTAACTTCTAAGTTCAGGAGAGAACCCAGCCGAAAATTGAATGCAAGTGAATGTGTGGCTCGTGGCTGTGCTCTTCAGTGTGCAATGCTAAGTCCTGTTTTCCGTGTTAGAGAATATGAGGTCCTGGATTTAAATCCATTCTCCATTGGACTTTCGTCAGATGATGGTCCAATTAGTGCAGTATCAAATGGCATACTTTTCCCAAAGGGGCAATCCATTCCAAGTGTTAAAGTTCTAACATTTCACCGAAGTAGTTTGTTCCATTTGGAAGCGTTCTATGCTAATCCAAATGAACTGCCACCGGGGACATCTCCTAAAATCAGTTGCTTCACGATTGGTCCTTTCCATGGGTCCCATGGCAGTAAGACAAGGATTAAAGTTAGAGTTCAACTAAATCTGCATGGCATTGTCACTGTCGAATCAGCTACAATGCTTGAAGATCAGGTAGATGATATAAAGGGTAATGACCATTCAAATAATGAATCAATGGATGTTGACCCTATCACTAATGAGACAGTAGCAAATGGTGAGGACACTAACAATAGAAAGGATGAATCTTCTCATAAATCTGCTGATTCTGTGAGGAAAGATAAAACTACCAAAAGACATGTGCCAGTGAGTGAGAACATCTATGGTGGAATGACCAAGGCTGAGATCTTGGAAGCTCATGACAAAGAGCTCCTGTTGACTCAACAGGACAGAGCTGTGGAGCGAACCAAAGAAAAGAAGAATAGCTTGGAGTCCTATATTTACGAGATGAGGAGTAAGCTCTTTGACACCTACCGGAGCTTTGCGAGTGACCAAGAGAGGGAAGGCATATCTAGAAGTCTGCAAGAGACTGAAGAGTGGCTTTATGAGGATGGTGATGATGAAACTGAGGTGGCTTTCGAAAGACTAGAAGATGTAAAGAAGCTTGTGGATCCAATTGAGAATCGGTATAAAGATGAAGAAGCAAGAGCACAAGCTACAAGAGATCTGTTGAAGTGCATTGTGGATCACCGCAAGTCTGCAGATTCCCTCCTTCCCCAGGATAAAGAATTGATCATAAACGAGTGCGATAAAGCAGAGCAGTGGCTGAGAGAGAAATTACAGCAACAAGATTCCTTGCCTAAGGACAATGACCCAATTATATGGTCAAGTGATATTAAAAGCAAGGCGGAGGATTTGAAACTGTTGTGCCAACAGGTGCTGGGATCCAAGGGTTCGTCAACAGTTCCAGAGGACAAAGGCAAAGACAAGCCAGATACTTCCAGTCACCTTTGA 2313 0.4259 MSVVGFDIGNENCVIAVVKQRGIDVLLNDESKRETPSVVCFGEKQRFMGSAGAASAMMNIKSTISQVKRLIGRKYADPDVQNELKMLPVETSEGQDGGILVHLKYLKETHTFTPVQILAMLLAHLKTLTEKDLEMPISDCVIGIPSYFSDLQRRAYLDAARVAGLKPVRLIHDCTATALGYGIYKTDFPGTGPTYVAFVDIGHCDTQVSIAAFESGKMKILSHAFDRDLGGRDFDEVLFSHFAAQFKEQYSIDVYSNVKACIRLRTACEKLKKVLSANNEAALNIECLMDEKDVKGFIKREEFEKLASGLLEKICVPCHKALIDARLTADKIDSVELVGSGSRVPAIARLLTSKFRREPSRKLNASECVARGCALQCAMLSPVFRVREYEVLDLNPFSIGLSSDDGPISAVSNGILFPKGQSIPSVKVLTFHRSSLFHLEAFYANPNELPPGTSPKISCFTIGPFHGSHGSKTRIKVRVQLNLHGIVTVESATMLEDQVDDIKGNDHSNNESMDVDPITNETVANGEDTNNRKDESSHKSADSVRKDKTTKRHVPVSENIYGGMTKAEILEAHDKELLLTQQDRAVERTKEKKNSLESYIYEMRSKLFDTYRSFASDQEREGISRSLQETEEWLYEDGDDETEVAYXERLEDVKKLVDPIENRYKDEEARAQATRDLLKCIVDHRKSADSLLPQDKELIINECDKAEQWLREKLQQQDSLPKDNDPIIWSSDIKSKAEDLKLLCQQVLGSKGSSTVPEDKGKDKPDTSSHL 771
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4591g00013 771 Gene3D - 564 675 IPR029048 -
Pral4591g00013 771 MobiDBLite consensus disorder prediction 751 771 - -
Pral4591g00013 771 Pfam Hsp70 protein 3 664 IPR013126 GO:0005524|GO:0140662
Pral4591g00013 771 Gene3D Actin; Chain A, domain 4 230 313 - -
Pral4591g00013 771 SUPERFAMILY Actin-like ATPase domain 1 185 IPR043129 -
Pral4591g00013 771 MobiDBLite consensus disorder prediction 756 771 - -
Pral4591g00013 771 Gene3D - 38 113 - -
Pral4591g00013 771 PANTHER HSC70CB, ISOFORM G-RELATED 1 756 - -
Pral4591g00013 771 Gene3D - 5 374 - -
Pral4591g00013 771 Gene3D - 186 360 - -
Pral4591g00013 771 PRINTS 70kDa heat shock protein signature 2 15 - -
Pral4591g00013 771 PRINTS 70kDa heat shock protein signature 388 407 - -
Pral4591g00013 771 PRINTS 70kDa heat shock protein signature 30 42 - -
Pral4591g00013 771 PRINTS 70kDa heat shock protein signature 140 160 - -
Pral4591g00013 771 PRINTS 70kDa heat shock protein signature 332 348 - -
Pral4591g00013 771 PRINTS 70kDa heat shock protein signature 472 488 - -
Pral4591g00013 771 PRINTS 70kDa heat shock protein signature 363 383 - -
Pral4591g00013 771 MobiDBLite consensus disorder prediction 527 554 - -
Pral4591g00013 771 MobiDBLite consensus disorder prediction 499 555 - -
Pral4591g00013 771 FunFam Heat shock 70 kDa protein 4 1 76 - -
Pral4591g00013 771 CDD HSPA4_like_NDB 2 381 - -
Pral4591g00013 771 SUPERFAMILY Heat shock protein 70kD (HSP70), peptide-binding domain 384 597 IPR029047 -
Pral4591g00013 771 SUPERFAMILY Actin-like ATPase domain 193 380 IPR043129 -
Pral4591g00013 771 FunFam Heat shock 70 kDa protein 4 564 674 - -
Pral4591g00013 771 FunFam Heat shock 70 kDa protein 4 230 313 - -
Pral4591g00013 771 FunFam Heat shock 70 kDa protein 4 97 195 - -
Pral4591g00013 771 MobiDBLite consensus disorder prediction 511 526 - -
Pral4591g00013 771 FunFam Heat shock 70 kDa protein 4 38 113 - -
Pral4591g00013 771 SUPERFAMILY Heat shock protein 70kD (HSP70), C-terminal subdomain 567 664 IPR029048 -
Pral4591g00013 771 Gene3D Substrate Binding Domain Of DNAk; Chain A, domain 1 387 561 IPR029047 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4591g00013 Pral-Chr4591 35770 41370 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4591g00013 4 660 Calmodulin-binding Proteins AT1G16030 29.217 3.63e-81 271