Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral458g00012 ATGGACTCACAGCAGATTTTCTGTTACAGTGAGACTGATACAGGACTTGTTAATTCATCATCTCATCCTGCTTTTTCATCAGTACCCAGCAGGCTGCTTGAATCCTTAAAAAGTGACTTAAGAAACTCACCTAATTCCTCCTTTTCTAATCACTTAGATTCTGATTCACTTTCAACATTGAGTGATAGCCAGGATAATAAATACAGTTATAGTGAGATTCATTCTGGTGTGAGCCCTTCTTGTGACTCTTCTCTGGAAACCACTCACAACTGGCACAGTTCAACATCGTCCATGGATTATCACCAAGATGGACCGCATCTATATTCTGCTAAGAGCTCTCTTCTAAACAATGTAAACTGCAGCCAGAAAATCAGACATGCTCTGTCAGAAATAGAATCATCTGTGATGGCCTCTAACAGTGGTAATGATGCCACCACATCAAATAGCCCTTCTAATAAGAATGTCAGTGGCAGGCCAATGACTTCTGGCCGTAGAAACATATCGTGGAGTGATGACCAGAGTTTACAGAGTTTTCAAGGTCAGCCATCTCTTGCTTCTAGTAGTCAGCAGTTGAGCGAAGTTGCACATGCAGAGAAACGACACAAAGCAATAGAGGAAGAATTGGTGCGGGGTTTTCCACCAAGTAATTTGAGACAGTTGTTGATTGCATGTGCAAAAGCGCTTTCAGAAAACAACGTGAAAGATTTTGATCAGCTGATTGAAAGGGCTAGGAGTTTTGTGTCTATTACTGGGGAGCCAATGCAAAGGCTCGGTGCTTATCTGGTAGAAGGGCTTGTTGCAAGGAAAGAGGCATCTGGGAACAACATCTATCGTTCTCTCAGATGCAAAGAGCCGGAAGGCAAAGACTTGCTCTCCTATATGCACAGGTTGTATGAAATCTGCCCCTACTTGAAATTTGGTTACATGGCTGCCAATGGAGCCATTGCAGAAGCTTGCAGAAATGAGGACTGTATTCACATCATAGACTTTCAGATTGCCCAGGGAAGTCAATGGGTGACTCTCCTTCAAGCCCTTGCAGCAAGACCCAGTGGGGCTCCATATGTCAGAATCACAGGGATTGATGATCCTCTTTCTAAATATGCTCGTGGCGATGGGCTTGAGGCAGTTAGTAAACGGTTGGCCATGATCTCTGAGAAATTTCACATCCCAGTTGAGTTTCATGGATTGCCAGTTTTCGGTCCTGATGTGACGAGGGACATGCTTGACATCCGGCCCGGAGAGGCTTTGGCTGTGAACTTTCCCTTGCAGCTCCATCACACAGCTGATGAAAGCGTTGATGTGAATAACCCAAGGGATGGGCTTCTCAGAATGGTTCATAGAAACCCTGGATTACTACTTGGCAATGTTCGAGTCCATCGATGTCACCACCCTCACGAGAGACGACAAGATGAGGATTAA 1419 0.4468 MDSQQIFCYSETDTGLVNSSSHPAFSSVPSRLLESLKSDLRNSPNSSFSNHLDSDSLSTLSDSQDNKYSYSEIHSGVSPSCDSSLETTHNWHSSTSSMDYHQDGPHLYSAKSSLLNNVNCSQKIRHALSEIESSVMASNSGNDATTSNSPSNKNVSGRPMTSGRRNISWSDDQSLQSFQGQPSLASSSQQLSEVAHAEKRHKAIEEELVRGFPPSNLRQLLIACAKALSENNVKDFDQLIERARSFVSITGEPMQRLGAYLVEGLVARKEASGNNIYRSLRCKEPEGKDLLSYMHRLYEICPYLKFGYMAANGAIAEACRNEDCIHIIDFQIAQGSQWVTLLQALAARPSGAPYVRITGIDDPLSKYARGDGLEAVSKRLAMISEKFHIPVEFHGLPVFGPDVTRDMLDIRPGEALAVNFPLQLHHTADESVDVNNPRDGLLRMVHRNPGLLLGNVRVHRCHHPHERRQDED 472
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral458g00012 472 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 153 450 IPR005202 -
Pral458g00012 472 MobiDBLite consensus disorder prediction 138 197 - -
Pral458g00012 472 MobiDBLite consensus disorder prediction 43 64 - -
Pral458g00012 472 Pfam GRAS domain family 217 447 IPR005202 -
Pral458g00012 472 MobiDBLite consensus disorder prediction 138 193 - -
Pral458g00012 472 ProSiteProfiles GRAS family profile. 208 472 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral458g00012 Pral-Chr458 58277 60107 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral458g00012 216 452 GRAS Transcription Factor Family AT1G50600 56.723 6.53e-91 284
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Pral458g00012 GRAS 2.7e-65 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral458g00012 - - adu:107462432 551.977