Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4589g00066 ATGATTTGCTCTGTGAAACAATCTGCTCTGGCGATCAGAAGTTCTTCCTCTGAAGGTATTTTCCAGGGAAAACATTCAAACCCAGTTCAGATGTCTTCGTTTTCACCTTCTCTTCCCAAGGCAAAGCTCCTGAAATCTCTTGTTTCTGTGCAAAAACCTTTGTACCTTTCCTCTACTGGGAAATTTGCTCCTGCGAAATCCCAAAAACAACAGAGTTTGATCACATGTAAAGCGTACGAGGCAGAGCGATCAGACATTGAAACAAGCACACCATCAGAGGCAGCTCAGAAGGTGAAAATTGGGATATACTTTGCAACATGGTGGGCTCTGAATGTGGTTTTCAATATTTATAACAAGAAGGTCCTCAATGCATATCCCTACCCTTGGCTTACTTCCACTCTCTCACTTGCATGTGGGTCTCTTATGATGTTGATCTCTTGGGCCACAAAGATAGCTGAGGCCCCTAAGACTGATATTGAGTTCTGGAAGACCTTGTTTCCTGTTGCTGTTGCACATACAATAGGACATGTAGCAGCAACCGTTAGCATGTCAAAAGTTGCAGTTTCATTCACCCACATCATCAAGAGTGGTGAGCCAGCGTTTAGTGTGTTGGTTTCAAGGCTTCTTTTGGGGGAGACCTTCCCGGTGCCGGTCTATCTGTCCTTGATTCCAATTATTGGTGGATGCGCTCTTGCTGCTGTGACTGAGCTAAATTTCAATATGACTGGTTTCATGGGTGCTATGATATCGAATTTGGCATTTGTGTTTCGCAATATCTTTTCGAAGAGGGGCATGAAGGGAAAGTCTGTCAGTGGAATGAACTACTACGCTTGTTTGTCAATGTTGTCTCTCTTGATTCTCGTGCCATTTGCATTTGCTGTGGAGGGACCACAGATGTGGGCAGCCGGATGGCAAACAGCCCTCTCGCAAATTGGACCCCAATTCATATGGTGGATGGCTGCTCAAAGTGTGTTCTATCATCTGTACAACCAGGTCTCATACATGTCTCTGGACGAGATCTCCCCTTTGACGTTTAGCATTGGCAACACCATGAAACGTATATCGGTTATAGTCTCTTCAATCATCATCTTCCACACGCCAGTTCAACCCGTCAATGCTTTTGGAGCTGCTATCGCCATCCTTGGAACCTTCTTGTATTCACAGGCAAAACAATAG 1176 0.4481 MICSVKQSALAIRSSSSEGIFQGKHSNPVQMSSFSPSLPKAKLLKSLVSVQKPLYLSSTGKFAPAKSQKQQSLITCKAYEAERSDIETSTPSEAAQKVKIGIYFATWWALNVVFNIYNKKVLNAYPYPWLTSTLSLACGSLMMLISWATKIAEAPKTDIEFWKTLFPVAVAHTIGHVAATVSMSKVAVSFTHIIKSGEPAFSVLVSRLLLGETFPVPVYLSLIPIIGGCALAAVTELNFNMTGFMGAMISNLAFVFRNIFSKRGMKGKSVSGMNYYACLSMLSLLILVPFAFAVEGPQMWAAGWQTALSQIGPQFIWWMAAQSVFYHLYNQVSYMSLDEISPLTFSIGNTMKRISVIVSSIIIFHTPVQPVNAFGAAIAILGTFLYSQAKQ 391
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4589g00066 391 PANTHER SOLUTE CARRIER FAMILY 35 99 390 - -
Pral4589g00066 391 Pfam Triose-phosphate Transporter family 99 387 IPR004853 -
Pral4589g00066 391 NCBIfam Tpt phosphate/phosphoenolpyruvate translocator 99 390 IPR004696 GO:0016020|GO:0022857|GO:0055085
Pral4589g00066 391 SUPERFAMILY Multidrug resistance efflux transporter EmrE 143 234 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4589g00066 Pral-Chr4589 490432 494545 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4589g00066 1 390 Antiporters AT5G54800 75.439 0.0 570
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4589g00066 K15283 - gmx:100801832 610.527