Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4589g00065 ATGGACTTCAAACCAAGGGCGTCAATTTTTGATAGCCTTTTCAAGGCTATTAAAGATGGCAAGAATAAGATGGTGGGCCTGTATGGTATTGGGGGCTCAGGTAAAACTACCTTGGCAATCGAAGTGGGTAAGAAAGCTGAAGGGCTGAAGCTTTTTGACAAAGCGGTCATGGTGGTTGTCTCTCGGCCTCTTAATGTTAGGAACATCCAAGAAGAAATAAAAGGAAAAGTCGGTTTGAAATTTGAGGAAAATACCGAATCAACCATAGCACCGAAGCTATTAACTGAATTGAAAAGTATGAAAATACTTATAATCTTGGACGATGTTTGGAGTGATCTGGATCTCCAACAAATTGGTATTCCGATGAATGAAAATTGTCATGTTTTGTTAACTACTCGTCGTCGAGATGTTTGTGTCCATATGGATTGTGAGGAAATTTTTGAATTGCCTCTCTTGATTGAGGAGGAGGCATGGGATTTGTTAAAGATGCATGCAAACATAACCCATGACTCATTGAATGAGTTTGTTGGTGTGGGGAAAAAAATTGTTGATGAGTGCAAGGGACTACCTATTGCAATTGTGACAGTGGGAAGGGCATTAAGAGGAAAAGGAATTGTGGAGTGGAAGTCAGCACTATGGAGACTACGACAATCCCTACCATTGGATATTGATGAGAGTTCGAGGGGCCCTTATGCATGCCTCAAATTGAGTTATGATTATTTGCCAACAAGTCTAGCAAAGCAACTCTTCCTATTATGCTCTATGTTTCCTGAGGATCATCAAATTCATAAAGAGGATCTTATTCGATTTGCTAAAGGGACTTTGAAATTTGAGGGGAATATTGTTTACACAATGGAGGATGCAAGGAGGGAGATTTCAGTAAGCATCAACAGTCTATTAGATTCTTGTTTATTAATGTATACAGATAAGCAAGCATCTGTGAAAATGCATGACTTAGTTCGGGATGTAGCTTTATGGATTGCAAGGGAGCAACATCAAGCAATTTTGGTGGATAACGATGCGGTTTCTAAAACGTTGGCTGAAAATGGAAGTTTGAAAGAGACAAAGGTAATATCATTATGGAATCTGGAAGGCAATTTTCCACAGTCTAATCAATTGCAATGTCCGACACTTGAGGTTCTGCTACTTCATCCCGAAGGGTTCATTGAAGATCTTGGAGGGACTGAAGCGCTCAAAATCTTGGTCCTTGTAACATCTAGTTTTCAATGGGAACGACTTGGTTGGCATAGACAAATTGGGTGGTCATTGCGGCAATCAATTGTGTCATCATTAATTAATCTTCATACCTTATGCTTCAGAGGAATTGCATTGGGTGACATCTCTTTTTTAGGTCAACTCAAAGGATTAGAGATTCTTGACTTGCGTGGTTCTCAATTTGGTGAATTACCTATTGGAATTGTAGATATGAAGAAATTGAAACTGTTGGATGTGTTTGGGTGTGAAATTGAGAACAGTCCTTTAGAAGTTATTGGAAGATGCAAGCAACTTGAAGAATTATACTTTTGGGATGAGAAATTTGCCGTGTCAGAAAATTTCTCTCTTTCAAGGTTAAAAAGGTATGTTATCTATGATACCACATCAATGACATTTACTATGAGTATTCCTATGAATCCAAATCCTCCTCTTCTAGAATATTTTGATGCTCATTGCATTGAAGAACTGAGAGCTTTATGCATACAAGGCTTCGAAGTCTCTGTTTCGAATTCATCAATGAAAGATCTCATTCTTGGAGCAAACTGCCTTTGGCTAGACAATTGTAGGTGGGATCTTAATGATATAAATTTTGAAATAAAGCACTTAGCAATTTCATGCTGTGTGGAGAAGAGATTCATAGCTGATAACCTGAGCACCAACAGTCTTCAAACAGGACAAGTGTTCTCCCACTTGATTAGTTTAAGATTGAGAAAAATGAATAGTCTTGAACGGGTGTTCCAAGATTCATCGGTCACATGTTCTCTCCCGATGTTACAAGAGCTATTTCTAGAGAGGTGTCCAGAATTGGGAACTTGCATCTTCACGCATGCCACTGTTACAAGCCTACCAAAATTGAGGAAACTTAAGATTGATTGTTGCAACAAATTGAAATGGCTATTCTCTTATTCTCTAGCTTTTCAGTGTCCTTCGCTAGAGGAATTGCGAATATGGGGTTGTCCTAAACTTGAGAGGCTTACTGATGAAGAAGAGGCGCAAGGTGATTTTCTACTGCACCAAAGGGAGTCCCTTCAAAACTACCCATACGGGAATCAGACTGTGGTCACTACTGCAGATAGCTCCCACCATTCACGAAATCAGAAACTCTGGACCCCTTTCCTAAGTCTGAAATATGTACATATTAGTAACAGTGGAATGAAAGGTAGTATGTTTGAGGTTCACCAAGTCAGAGGAACAGAATCTATTGAAGCAAGAGACGAACCTTTGACACTGAATTCAGAGTTGTGTTCTTTATATTTATCAGATCTTGAAGAGTTGGAATACATTTGGAAGGGCCCCACACAAAGTGTGAGCCTCCATAGACTTGAAAGTGTTGAATTGTGGATATGCCCAAAGTTGAGGAATATTTTCACTCTTGCAATTGTCACAAGCCTTCCAGAATTGAAGACATTAGAAGTATATTCTTGTGAGGAATTGGAGGAAATATTTTGGGAAGAATCACTTGAAAATCTTTCTTCTTCTTCTAATGTTTGCTTCCCCAAACTTAAGAATATTGAGATATGGGGATCCCATAAAATCAAAAGGGTGTTCTCATATTCTGTGGCTTCTCATCATTGTCCTTCACTAGAGAGGCTGGGCATAAGTGATTGCTCTGAACTGGAAAGGGTTGTTGATGAAGAAGCAGCACGTGATGTGGATTGGCGGCTACCTCTTCTCAAACTGAAGGAATTAAATCTACGATGGTTGCCAAAATTAAGAGAGATATTTGGAAGAGCATTATTGGACTGTCCGCAACACGTAAGTATTTTCCGCAAACAATCAAATATTACTTTTAGCTCAACTTGTCGCTTCTTTGATAATAAATACTAA 3042 0.3899 MDFKPRASIFDSLFKAIKDGKNKMVGLYGIGGSGKTTLAIEVGKKAEGLKLFDKAVMVVVSRPLNVRNIQEEIKGKVGLKFEENTESTIAPKLLTELKSMKILIILDDVWSDLDLQQIGIPMNENCHVLLTTRRRDVCVHMDCEEIFELPLLIEEEAWDLLKMHANITHDSLNEFVGVGKKIVDECKGLPIAIVTVGRALRGKGIVEWKSALWRLRQSLPLDIDESSRGPYACLKLSYDYLPTSLAKQLFLLCSMFPEDHQIHKEDLIRFAKGTLKFEGNIVYTMEDARREISVSINSLLDSCLLMYTDKQASVKMHDLVRDVALWIAREQHQAILVDNDAVSKTLAENGSLKETKVISLWNLEGNFPQSNQLQCPTLEVLLLHPEGFIEDLGGTEALKILVLVTSSFQWERLGWHRQIGWSLRQSIVSSLINLHTLCFRGIALGDISFLGQLKGLEILDLRGSQFGELPIGIVDMKKLKLLDVFGCEIENSPLEVIGRCKQLEELYFWDEKFAVSENFSLSRLKRYVIYDTTSMTFTMSIPMNPNPPLLEYFDAHCIEELRALCIQGFEVSVSNSSMKDLILGANCLWLDNCRWDLNDINFEIKHLAISCCVEKRFIADNLSTNSLQTGQVFSHLISLRLRKMNSLERVFQDSSVTCSLPMLQELFLERCPELGTCIFTHATVTSLPKLRKLKIDCCNKLKWLFSYSLAFQCPSLEELRIWGCPKLERLTDEEEAQGDFLLHQRESLQNYPYGNQTVVTTADSSHHSRNQKLWTPFLSLKYVHISNSGMKGSMFEVHQVRGTESIEARDEPLTLNSELCSLYLSDLEELEYIWKGPTQSVSLHRLESVELWICPKLRNIFTLAIVTSLPELKTLEVYSCEELEEIFWEESLENLSSSSNVCFPKLKNIEIWGSHKIKRVFSYSVASHHCPSLERLGISDCSELERVVDEEAARDVDWRLPLLKLKELNLRWLPKLREIFGRALLDCPQHVSIFRKQSNITFSSTCRFFDNKY 1013
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4589g00065 1013 PRINTS Disease resistance protein signature 96 110 - -
Pral4589g00065 1013 PRINTS Disease resistance protein signature 24 39 - -
Pral4589g00065 1013 PRINTS Disease resistance protein signature 186 200 - -
Pral4589g00065 1013 PRINTS Disease resistance protein signature 685 701 - -
Pral4589g00065 1013 SMART AAA_5 21 152 IPR003593 GO:0016887
Pral4589g00065 1013 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 4 253 IPR027417 -
Pral4589g00065 1013 Pfam NB-ARC domain 11 218 IPR002182 GO:0043531
Pral4589g00065 1013 Gene3D - 4 147 IPR027417 -
Pral4589g00065 1013 Gene3D - 152 237 IPR042197 -
Pral4589g00065 1013 Gene3D Ribonuclease Inhibitor 736 999 IPR032675 -
Pral4589g00065 1013 Gene3D - 238 324 IPR036388 -
Pral4589g00065 1013 Gene3D Ribonuclease Inhibitor 325 556 IPR032675 -
Pral4589g00065 1013 PANTHER NB-ARC DOMAIN-CONTAINING PROTEIN-RELATED 765 912 - -
Pral4589g00065 1013 Gene3D Ribonuclease Inhibitor 585 735 IPR032675 -
Pral4589g00065 1013 SUPERFAMILY L domain-like 309 981 - -
Pral4589g00065 1013 FunFam Probable disease resistance protein At1g61300 6 145 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4589g00065 Pral-Chr4589 473121 477165 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4589g00065 23 334 WRKY Transcription Factor Family AT5G45050 25.305 1.38e-08 57.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4589g00065 - - pcin:129306241 1059.67