Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4589g00062 ATGGAAGAAATTGGGACTTGTATAGCGACCAAGCTTGCAGAGTGTCTATGGGATCCAATTTCACGTCGCGCTCGTTATTTGTTTTGCTTCAACCAATTCAATGGAGGTTTTGAGAAAGCAAAAGAAGGGCTGGAGGTGACATTAGCAGACTTGAACAAGCGCAAGGAAGAAGCTGATCGAAAAATTGAAGAAATAATGCCATCTGTGAGGAAGTGGTTGGATGATGTGAATGCTATCCTAGAGGAGGTGCAAAAGGTGCAACAGGAGGTTGAACGAGAAGGAAAGAAATGTTTTAACATGTCACTCAAGTATTCCTTAGCAAAACAAATGGATGATGTGGCTGAGCAAATGAAGGAACTCAAGAGCAATTCCCACTTTGATCCATTTTCCCAGTCGATCCCACTTCCTGACATTACCTACTTCCCTTCCAAAGAGTTTGTGGATTTCAACTCCAGAAAATCGACTTATAATCATCTTTTGGAGGCAGTTAAAGATGGCAAGAACAAGATGATTGGGCTCTATGGTATTGGCGGTTCAGGTAAAACCACTTTGGCAAAAGAAGTAGGCAAGACAATGCATGATTTGAAGCTTTTTGACAAGTTCATCATGGTGGTTGTTTCGAAACCTCCAAATGAAGTAAAAATTCAGCAAGAAATAGCAGACCAAATTGATTTGAAATTTGATGTGGCCACTCAATCTGTAAGAGCACAAAGGCTATCAGAAAGATTGAGAAGTATGAAAATTCTTATAATCTTGGATGATGTGTGGAGTAATGATCTAAACTTTCAAGAAATTGGTATTCCGATTAATGAAAATTGTTGTGTTTTGTTAACTACTCGTCTTCGAGATGTTTGTGTCTTTATGGGTTGTGAGGAAAATTTTGAATTGTCTCTCTTGATAGAGGAGGAAGCATGGGATTTGTTAAAGATGCATGCAAACTTAACCCATGACACATTGAATGAGTTTGTTGGTGTGGGAAAGAAAATTGTTGATGAGTGCAAGGGACTACCTATTGCAATTGTGACAGTGGGAAAGGCATTAAGAGGAAAAGGTATTCGGGACTGGAAGTTAACACTACGGAGGCTACAACAATCCCTACCATTGGATATTGATGAGAGTTTAAGGGGCCCTTATGCATGTCTCAAATTGAGTTATGATTATTTGCCAAGTCTAGCAAAGCACCTCTTCCTATTGTGCTCTATGTTTCCTGAGGATCATCAAATTCATAGAGAGGATCTTGTTCGATTTGCCAAACGGACTTTGGAAGTTGAGGGGATTGTTTACACGATGGAGGATGCAAGGAGGGAGATTTTAGTAAGCATTGACAGGCTATTAGATTCTTGTTTATTAATGCATACAAATGAGCAAGCATGTGTAAAAATGCATGACTTAGTTCGGGATGTAGCTTTGTGGATTGCGAGGGAGCAACATCAAGCAATTTTGGTGGATAGCAATGCGGTTTCAAAAATGTTGGCTGAAAATGAAAGTTTGAAAGAGACAAAGGTAATATCATTATGGAATCTGGAAGGCAATTTTTGGCAGTCTAATCAATTGCATTGTCCAACACTTGAGGTTCTGCTACTTCATCCCAAAGGGTTCATTGAAGATCTTGGAGGGATTGAAGCGCTCAAAATCTTGGTCCTTGCAACATCTAGCTTTCAATGGAAAGGACTTGGTTGGCGTACACAAATTCAATGGTCAATGCCGCAATCAATTGTGTCATCATTAATTAATCTTCATACCTTATGCTTCAGAGGAATTGCATTGGATGACATCTCTTTTCTAGGTCAACTCAAAGGATTAGAGATTCTTGACTTGCGTGGTTCTCAATTTGGTGAATTACCTATTGGAATTGTAGGTATGAAAAAATTGAAGCTGCTGGATGTGTTTGGGTGTGAAATTGAAAAAAGTCCTCTTGGAATTATTGGAAAATGTGAGCAACTTGAGGAATTATACTTTTGGGAAAAGAAATCTGCCATATCAGAAAATTTCTCTCTTTCGAGGTTGAAGAGGTACGTTATCTATGACACCACATCATTGAATATTTCTAGTTATGAAGATCCTCCTTTTGTAGAATATTTTGATGCTCATTGCATTGAAGAACTGAGAGCTTTATGCATACAAGGCTTCAAAGCCTCTGTTTCGAATTCGTCAATGAAAGATCTCATTCTTGGAGCAAACTGTCTTTGGTTAGACAATTGTAGGTGGGATCTTAATGATATAAATTTTGAAATAAAGCACTTAGCAATTTCACGCTGTCTGGAGAAGATATTCATAGCTGATAACATGAGCGCCAACATTCTTCAAATAGGACGAGTGTTCTCCCACCTGATTAGTTTAAGATTGAGAAACATGAATAGTCTTGAACAAGTGTTCCAAGATTCATCGATCACATGTTCTCTTCCGATGTTTGTTTCTACAGAGCTGTCCAGAATTGGGAACCTGCATCTTCACCTATGCCACTGTTACAAGCCTACCGAAGCTGAGGAAACTTGA 2496 0.389 MEEIGTCIATKLAECLWDPISRRARYLFCFNQFNGGFEKAKEGLEVTLADLNKRKEEADRKIEEIMPSVRKWLDDVNAILEEVQKVQQEVEREGKKCFNMSLKYSLAKQMDDVAEQMKELKSNSHFDPFSQSIPLPDITYFPSKEFVDFNSRKSTYNHLLEAVKDGKNKMIGLYGIGGSGKTTLAKEVGKTMHDLKLFDKFIMVVVSKPPNEVKIQQEIADQIDLKFDVATQSVRAQRLSERLRSMKILIILDDVWSNDLNFQEIGIPINENCCVLLTTRLRDVCVFMGCEENFELSLLIEEEAWDLLKMHANLTHDTLNEFVGVGKKIVDECKGLPIAIVTVGKALRGKGIRDWKLTLRRLQQSLPLDIDESLRGPYACLKLSYDYLPSLAKHLFLLCSMFPEDHQIHREDLVRFAKRTLEVEGIVYTMEDARREILVSIDRLLDSCLLMHTNEQACVKMHDLVRDVALWIAREQHQAILVDSNAVSKMLAENESLKETKVISLWNLEGNFWQSNQLHCPTLEVLLLHPKGFIEDLGGIEALKILVLATSSFQWKGLGWRTQIQWSMPQSIVSSLINLHTLCFRGIALDDISFLGQLKGLEILDLRGSQFGELPIGIVGMKKLKLLDVFGCEIEKSPLGIIGKCEQLEELYFWEKKSAISENFSLSRLKRYVIYDTTSLNISSYEDPPFVEYFDAHCIEELRALCIQGFKASVSNSSMKDLILGANCLWLDNCRWDLNDINFEIKHLAISRCLEKIFIADNMSANILQIGRVFSHLISLRLRNMNSLEQVFQDSSITCSLPMFVSTELSRIGNLHLHLCHCYKPTEAEET 831
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4589g00062 831 Gene3D - 385 470 IPR036388 -
Pral4589g00062 831 Gene3D - 299 384 IPR042197 -
Pral4589g00062 831 Pfam NB-ARC domain 157 385 IPR002182 GO:0043531
Pral4589g00062 831 Coils Coil 41 61 - -
Pral4589g00062 831 Gene3D - 139 294 IPR027417 -
Pral4589g00062 831 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 131 399 IPR027417 -
Pral4589g00062 831 Gene3D Ribonuclease Inhibitor 518 829 IPR032675 -
Pral4589g00062 831 PANTHER NB-ARC DOMAIN-CONTAINING PROTEIN-RELATED 37 820 - -
Pral4589g00062 831 PRINTS Disease resistance protein signature 596 612 - -
Pral4589g00062 831 PRINTS Disease resistance protein signature 170 185 - -
Pral4589g00062 831 PRINTS Disease resistance protein signature 333 347 - -
Pral4589g00062 831 PRINTS Disease resistance protein signature 242 256 - -
Pral4589g00062 831 Coils Coil 69 96 - -
Pral4589g00062 831 SUPERFAMILY L domain-like 460 787 - -
Pral4589g00062 831 SMART AAA_5 167 311 IPR003593 GO:0016887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4589g00062 Pral-Chr4589 444526 447021 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4589g00062 169 479 WRKY Transcription Factor Family AT5G45050 25.697 1.47e-08 56.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4589g00062 - - pcin:129306241 979.933