Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4589g00038 ATGCATTTGGTTGACCTCTCGATTATGGGAAACAGATTGTCAGGCCCTTTCCCTGCAGTTCTCACGAACATCACGACTCTCCAGAACCTGACTATTGAAGGAAATCTATTTTCGGGTCCCATTCCACGAGATATTGGAAACTTGATCAAGTTAGAAAAACTCCATCTGTCGTCAAACGCATTCACTGGAGAATTGCCAGTTGAACTTTCCAAATTGAAGAATTTGACTGACTTGAGGCTAAGCGACAATAACATCTCTGGGCGCATTCCTGATTTTATTGGAAGCTGGACATTAATTGAAAAGCTGCACATGGAGGGTTGCTCTCTTGAGGGGCCCATACCTTCAAGCATTTCAGCCTTGACAAGCTTAAGTGATTTGAGGATAACTGATCTAAAAGGTGGAGCCTCTGATTTCCCATCATTAAGAAACATGAAATTCATGGAGAAATTGATATTGAGGAACTGTATGATTAAAGGGGAGATCCCAGAAGATATTGGGAGAATGGAAAACCTGATAACCTTAGATCTGAGTTTCAATAACTTGACTGGAGAGATACCGGCTACTCTTGCCCAACTTAGAAGAGTAAAATTTGTATATCTTACTGGGAACAAGCTAGGAGGGACTATTCCTGAGTGGGTCCTTGAATCGAACAAGCAAGTTGATATTTCTAATAATAACTTTAGCTGGGATGGCTCAGGTCCTGTTGAATGCCTGCAAGGGAGCGTGAACATGGTCGAATGCTACTCTTCTTCTGTGGATACAGAAAGTAGAGTTAATCCATGCATGAAAAGGAATTTCCCATGTCCTGCTTCCACCGGGCAATATCATTATTCATTTCATGTTAATTGTGGTGGTGAGGAAGCCAATGTCAATGATACAATATATGAATCTGACATAGAAAAAAGAGGTGCTGCAGTGTTTTACTCCACCCAGAACTGGGCGCTTAGCAGCACAGGGGACTTCATGGACAATCATCAGAACTCTGATAACTACATTCAGACCAATACTTCTACACTTCTGAATGTCTCCGTCGTCGATTCACAACTATACACAACAGCTCGCATATCTCCTCTTTCTCTCACATACTATGGACTTTGTCTCTTAAATGGAAACTATACTGTGAAGCTTCACTTCGCGGAGATTTTGTTCTTGAATGATAGATCATATTACTGTCTTGGAAGGAGGATATTTGATGTCTACATCCAGGGGAATTTGGTCCTGAAAGACTTCAATATAGAAAGTGAAGCTGGTGGTACTGGGAAGCCAGTTGTGAAGACATTCAATACTACAGTCACCCGACATACCCTGAAAATTCACTTCTACTGGGCTGGAAAGGGCACAACAGACATACCACGAAGAGGATATTATGGACCTCTGGTGTCTGCTATATCTGTGTATCCTAATTTCAAACCTCCATCCGGGGATGGAAAGAGAATTTACATCGTGGTGGGCACAATCATTGCTGTTGTAGTTCTTGTTCTCCTGGTCTTGAGCGTCATGAAGTGGAAGGGCTGGCTAGGAGGCAATGACTCTGTATACAAAGATCTTAGAGGTTTAGATCTGCAGATGGGATTATTTACTTCAAGACAAATCAAAGCAGCAACTGAAAACTTCAATGCAGCCAACAAAATTGGGGAAGGTGGATTTGGCTCTGTTTACAAGGGTCTACTGCCAGATGGCACAGTAATTGCAGTAAAGCAGCTCTCCTCAAAATCTACACAAGGAATCCGTGAATTTGTTAATGAGTTAGGAATGATATCTGGGCTTCAACATCCCAATCTTGTTAAGCTTTATGGATGTTGTGTGGAAGGAGACCAGTTAATGCTGGTATATGAGTATATGGAAAACAATTGTCTATCTCGTTTTCTTTTTGGGAAGGATTCTGGCCGCCGAGTGCTATTGGACTGGCCAACTCGGAGGAAAATTTGCCTTGGCATAGCTAGAGCTTTGGCTTATCTCCACGAAGAGTGCGTGATTAAAATCATACACAGGGATATAAAAACAAGTAATGTGTTGCTTGATAAGGATTTTAATGCTAAGATTTCAGACTTTGGTTTTGCAAAACTCAATGTAGATGAAAATTCCCATGTTAGCACTCGCATTGCAGGAACTATAGGTTATATGGCTCCTGAATATGCAATGCGTGGTCATCTAACTGATAAAGCTGACGTTTATAGTTTCGGGGTCGTTGCATTGGAAATTGTCAGTGGAAAGAGTAATACAAATTTCAGACTCAGTGAGGAATTCATTTTCCTCCTTGATTGGGCCAATGTTTTGAAAGAGAACGGAAGACTACTAGAGCTGGTCGATCCAGATTTGGGTTCAGAATACTCAACGGAGGAGGCCATGGTAATTCTAAACGTGGCACTCTTGTGTACCAATGCATCTCCTGCGCTTAGGCCAACAATGTCTCAAGTTCTGAACATGCTTGAAGGAAGAAGTAACATGGAGGATCTACTTTCTGATCCAGGACATCAAGCAGCTAATTTCAAATATGAGGCCCTAAGAAGTCACTTCTCTGAGAATCTGAGCCTCCGAGAAAGCATGTCAATTCATGGTCAATGCCCTTATTCCTCTAGTTCAGGCGTTGAAGTAGAAGAGAAGCACCTTCTTGTACGTGCTGGAGCAGACACAACTAAAGCAGACCAGTGA 2652 0.4201 MHLVDLSIMGNRLSGPFPAVLTNITTLQNLTIEGNLFSGPIPRDIGNLIKLEKLHLSSNAFTGELPVELSKLKNLTDLRLSDNNISGRIPDFIGSWTLIEKLHMEGCSLEGPIPSSISALTSLSDLRITDLKGGASDFPSLRNMKFMEKLILRNCMIKGEIPEDIGRMENLITLDLSFNNLTGEIPATLAQLRRVKFVYLTGNKLGGTIPEWVLESNKQVDISNNNFSWDGSGPVECLQGSVNMVECYSSSVDTESRVNPCMKRNFPCPASTGQYHYSFHVNCGGEEANVNDTIYESDIEKRGAAVFYSTQNWALSSTGDFMDNHQNSDNYIQTNTSTLLNVSVVDSQLYTTARISPLSLTYYGLCLLNGNYTVKLHFAEILFLNDRSYYCLGRRIFDVYIQGNLVLKDFNIESEAGGTGKPVVKTFNTTVTRHTLKIHFYWAGKGTTDIPRRGYYGPLVSAISVYPNFKPPSGDGKRIYIVVGTIIAVVVLVLLVLSVMKWKGWLGGNDSVYKDLRGLDLQMGLFTSRQIKAATENFNAANKIGEGGFGSVYKGLLPDGTVIAVKQLSSKSTQGIREFVNELGMISGLQHPNLVKLYGCCVEGDQLMLVYEYMENNCLSRFLFGKDSGRRVLLDWPTRRKICLGIARALAYLHEECVIKIIHRDIKTSNVLLDKDFNAKISDFGFAKLNVDENSHVSTRIAGTIGYMAPEYAMRGHLTDKADVYSFGVVALEIVSGKSNTNFRLSEEFIFLLDWANVLKENGRLLELVDPDLGSEYSTEEAMVILNVALLCTNASPALRPTMSQVLNMLEGRSNMEDLLSDPGHQAANFKYEALRSHFSENLSLRESMSIHGQCPYSSSSGVEVEEKHLLVRAGADTTKADQ 883
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4589g00038 883 FunFam Putative LRR receptor-like serine/threonine-protein kinase isoform A 65 132 - -
Pral4589g00038 883 SMART serkin_6 538 810 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4589g00038 883 ProSitePatterns Serine/Threonine protein kinases active-site signature. 661 673 IPR008271 GO:0004672|GO:0006468
Pral4589g00038 883 Gene3D Ribonuclease Inhibitor 93 239 IPR032675 -
Pral4589g00038 883 SUPERFAMILY L domain-like 2 228 - -
Pral4589g00038 883 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 276 468 - -
Pral4589g00038 883 ProSitePatterns Protein kinases ATP-binding region signature. 544 566 IPR017441 GO:0005524
Pral4589g00038 883 Pfam Leucine Rich Repeat 170 190 IPR001611 GO:0005515
Pral4589g00038 883 SUPERFAMILY Protein kinase-like (PK-like) 523 812 IPR011009 -
Pral4589g00038 883 FunFam Putative LRR receptor-like serine/threonine-protein kinase 614 822 - -
Pral4589g00038 883 ProSiteProfiles Protein kinase domain profile. 538 820 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4589g00038 883 Gene3D Ribonuclease Inhibitor 1 92 IPR032675 -
Pral4589g00038 883 Pfam Protein tyrosine and serine/threonine kinase 541 810 IPR001245 GO:0004672|GO:0006468
Pral4589g00038 883 Gene3D Transferase(Phosphotransferase) domain 1 614 828 - -
Pral4589g00038 883 Gene3D Phosphorylase Kinase; domain 1 511 613 - -
Pral4589g00038 883 Gene3D - 275 468 - -
Pral4589g00038 883 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 139 230 - -
Pral4589g00038 883 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 2 847 - -
Pral4589g00038 883 Pfam Malectin domain 278 463 IPR021720 -
Pral4589g00038 883 CDD STKc_IRAK 544 812 - -
Pral4589g00038 883 FunFam probable LRR receptor-like serine/threonine-protein kinase At1g53430 508 613 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4589g00038 Pral-Chr4589 274708 284642 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4589g00038 6 93 Receptor kinase-like Gene Family AT1G07650 32.955 7.47e-07 51.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pral4589g00038 PK_Tyr_Ser-Thr 1.2e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4589g00038 - - vun:114195543 1241.87