Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4589g00037 ATGACTGGGACTTTGAAAAAGATGATCCTTGCAGTGGGAAAGGGCAGTGGAATGCGTCTGATGAGAGCGCACATTTTGAGAGCATTGTGGTCTGTAAATGTAACGAGTCTTCTTGCCATGTTATCCTTGAAGGCCCAGAATCTTTCTGGTGCTATCCCGCCGGAATTTTCCAAGCTAAATCATCTCAAGAAACTGACACTGAGTCTTAACATTCTCAATGGTTCTATACCTGGCCAATGGGCTAATATGCATTTGGTTGACCTCTCGATTATGGGAAACAGATTGTCAGGCCCTTTCCCTGCAGTTCTCACGAACATCACGACTCTCCAGAACCTGACTATTGAAGGAAATCTATTTTCGGGTCCCATTCCACGAGATATTGGAAACTTGATCAAGTTAGAAAAACTCCATCTGTCGTCAAACGCATTCACTGGAGAATTGCCAGTTGAACTTTCCAAATTGAAGAATTTGACTGACTTGAGGCTAAGCGACAATAACATCTCTGGGCGCATTCCTGATTTTATTGGAAGCTGGACATTAATTGAAAAGCTGCACATGGAGGGTTGCTCTCTTGAGGGGCCCATACCTTCAAGCATTTCAGCCTTGACAAGCTTAAGTGATTTGAGGATAACTGATCTAAAAGGTGGAGCCTCTGATTTCCCATCATTAAGAAACATGAAATTCATGGAGAAATTGATATTGAGGAACTGTATGATTAAAGGGGAGATCCCAGAAGATATTGGGAGAATGGAAAACCTGATAACCTTAGATCTGAGTTTCAATAACTTGACTGGAGAGATACCGGCTACTCTTGCCCAACTTAGAAGAGTAAAATTTGTATATCTTACTGGGAACAAGCTAGGAGGGACTATTCCTGAGTGGGTCCTTGAATCGAACAAGCAAGTTGATATTTCTAATAATAACTTTAGCTGGGATGGCTCAGGTCCTGTTGAATGCCTGCAAGGGAGCGTGAACATGGTCGAATGCTACTCTTCTTCTGTGGATACAGAAAGTAGAGTTAATCCATGCATGAAAAGGAATTTCCCATGTCCTGCTTCCACCGGGCAATATCATTATTCATTTCATGTTAATTGTGGTGGTGAGGAAGCCAATGTCAATGATACAATATATGAATCTGACATAGAAAAAAGAGGTGCTGCAGTGTTTTACTCCACCCAGAACTGGGCGCTTAGCAGCACAGGGGACTTCATGGACAATCATCAGAACTCTGATAACTACATTCAGACCAATACTTCTACACTTCTGAATGTCTCCGTCGTCGATTCACAACTATACACAACAGCTCGCATATCTCCTCTTTCTCTCACATACTATGGACTTTGTCTCTTAAATGGAAACTATACTGTGAAGCTTCACTTCGCGGAGATTTTGTTCTTGAATGATAGATCATATTACTGTCTTGGAAGGAGGATATTTGATGTCTACATCCAGGGGAATTTGGTCCTGAAAGACTTCAATATAGAAAGTGAAGCTGGTGGTACTGGGAAGCCAGTTGTGAAGACATTCAATACTACAGTCACCCGACATACCCTGAAAATTCACTTCTACTGGGCTGGAAAGGGCACAACAGACATACCACGAAGAGGATATTATGGACCTCTGGTGTCTGCTATATCTGTGTATCCTAATTTCAAACCTCCATCCGGGGATGGAAAGAGAATTTACATCGTGGTGGGCACAATCATTGCTGTTGTAGTTCTTGTTCTCCTGGTCTTGAGCGTCATGAAGTGGAAGGGCTGGCTAGGAGGCAATGACTCTGTATACAAAGATCTTAGAGGTTTAGATCTGCAGATGGGATTATTTACTTCAAGACAAATCAAAGCAGCAACTGAAAACTTCAATGCAGCCAACAAAATTGGGGAAGGTGGATTTGGCTCTGTTTACAAGGGTCTACTGCCAGATGGCACAGTAATTGCAGTAAAGCAGCTCTCCTCAAAATCTACACAAGGAATCCGTGAATTTGTTAATGAGTTAGGAATGATATCTGGGCTTCAACATCCCAATCTTGTTAAGCTTTATGGATGTTGTGTGGAAGGAGACCAGTTAATGCTGGTATATGAGTATATGGAAAACAATTGTCTATCTCGTTTTCTTTTTGGGAAGGATTCTGGCCGCCGAGTGCTATTGGACTGGCCAACTCGGAGGAAAATTTGCCTTGGCATAGCTAGAGCTTTGGCTTATCTCCACGAAGAGTGCGTGATTAAAATCATACACAGGGATATAAAAACAAGTAATGTGTTGCTTGATAAGGATTTTAATGCTAAGATTTCAGACTTTGGTTTTGCAAAACTCAATGTAGATGAAAATTCCCATGTTAGCACTCGCATTGCAGGAACTATAGGTTATATGGCTCCTGAATATGCAATGCGTGGTCATCTAACTGATAAAGCTGACGTTTATAGTTTCGGGGTCGTTGCATTGGAAATTGTCAGTGGAAAGAGTAATACAAATTTCAGACTCAGTGAGGAATTCATTTTCCTCCTTGATTGGGCCAATGTTTTGAAAGAGAACGGAAGACTACTAGAGCTGGTCGATCCAGATTTGGGTTCAGAATACTCAACGGAGGAGGCCATGGTAATTCTAAACGTGGCACTCTTGTGTACCAATGCATCTCCTGCGCTTAGGCCAACAATGTCTCAAGTTCTGAACATGCTTGAAGGAAGAAGTAACATGGAGGATCTACTTTCTGATCCAGGACATCAAGCAGCTAATTTCAAATATGAGGCCCTAAGAAGTCACTTCTCTGAGAATCTGAGCCTCCGAGAAAGCATGTCAATTCATGGTCAATGCCCTTATTCCTCTAGTTCAGGCGTTGAAGTAGAAGAGAAGCACCTTCTTGTACGTGCTGGAGCAGACACAACTAAAGCAGACCAGTGA 2898 0.422 MTGTLKKMILAVGKGSGMRLMRAHILRALWSVNVTSLLAMLSLKAQNLSGAIPPEFSKLNHLKKLTLSLNILNGSIPGQWANMHLVDLSIMGNRLSGPFPAVLTNITTLQNLTIEGNLFSGPIPRDIGNLIKLEKLHLSSNAFTGELPVELSKLKNLTDLRLSDNNISGRIPDFIGSWTLIEKLHMEGCSLEGPIPSSISALTSLSDLRITDLKGGASDFPSLRNMKFMEKLILRNCMIKGEIPEDIGRMENLITLDLSFNNLTGEIPATLAQLRRVKFVYLTGNKLGGTIPEWVLESNKQVDISNNNFSWDGSGPVECLQGSVNMVECYSSSVDTESRVNPCMKRNFPCPASTGQYHYSFHVNCGGEEANVNDTIYESDIEKRGAAVFYSTQNWALSSTGDFMDNHQNSDNYIQTNTSTLLNVSVVDSQLYTTARISPLSLTYYGLCLLNGNYTVKLHFAEILFLNDRSYYCLGRRIFDVYIQGNLVLKDFNIESEAGGTGKPVVKTFNTTVTRHTLKIHFYWAGKGTTDIPRRGYYGPLVSAISVYPNFKPPSGDGKRIYIVVGTIIAVVVLVLLVLSVMKWKGWLGGNDSVYKDLRGLDLQMGLFTSRQIKAATENFNAANKIGEGGFGSVYKGLLPDGTVIAVKQLSSKSTQGIREFVNELGMISGLQHPNLVKLYGCCVEGDQLMLVYEYMENNCLSRFLFGKDSGRRVLLDWPTRRKICLGIARALAYLHEECVIKIIHRDIKTSNVLLDKDFNAKISDFGFAKLNVDENSHVSTRIAGTIGYMAPEYAMRGHLTDKADVYSFGVVALEIVSGKSNTNFRLSEEFIFLLDWANVLKENGRLLELVDPDLGSEYSTEEAMVILNVALLCTNASPALRPTMSQVLNMLEGRSNMEDLLSDPGHQAANFKYEALRSHFSENLSLRESMSIHGQCPYSSSSGVEVEEKHLLVRAGADTTKADQ 965
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4589g00037 965 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 221 312 - -
Pral4589g00037 965 ProSitePatterns Serine/Threonine protein kinases active-site signature. 743 755 IPR008271 GO:0004672|GO:0006468
Pral4589g00037 965 Gene3D - 357 550 - -
Pral4589g00037 965 Pfam Protein tyrosine and serine/threonine kinase 623 892 IPR001245 GO:0004672|GO:0006468
Pral4589g00037 965 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 358 550 - -
Pral4589g00037 965 Pfam Malectin domain 360 545 IPR021720 -
Pral4589g00037 965 SMART serkin_6 620 892 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4589g00037 965 CDD STKc_IRAK 626 894 - -
Pral4589g00037 965 FunFam probable LRR receptor-like serine/threonine-protein kinase At1g53430 590 695 - -
Pral4589g00037 965 FunFam Putative LRR receptor-like serine/threonine-protein kinase 696 904 - -
Pral4589g00037 965 Gene3D Phosphorylase Kinase; domain 1 593 695 - -
Pral4589g00037 965 Pfam Leucine Rich Repeat 252 272 IPR001611 GO:0005515
Pral4589g00037 965 FunFam Putative LRR receptor-like serine/threonine-protein kinase isoform A 147 214 - -
Pral4589g00037 965 SUPERFAMILY L domain-like 36 311 - -
Pral4589g00037 965 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 40 929 - -
Pral4589g00037 965 SUPERFAMILY Protein kinase-like (PK-like) 605 894 IPR011009 -
Pral4589g00037 965 Gene3D Ribonuclease Inhibitor 148 211 IPR032675 -
Pral4589g00037 965 Gene3D Ribonuclease Inhibitor 212 318 IPR032675 -
Pral4589g00037 965 Gene3D Ribonuclease Inhibitor 28 147 IPR032675 -
Pral4589g00037 965 ProSiteProfiles Protein kinase domain profile. 620 902 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4589g00037 965 ProSitePatterns Protein kinases ATP-binding region signature. 626 648 IPR017441 GO:0005524
Pral4589g00037 965 Gene3D Transferase(Phosphotransferase) domain 1 696 910 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4589g00037 Pral-Chr4589 274708 285717 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4589g00037 41 924 Receptor kinase-like Gene Family AT1G53430 54.586 0.0 943
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pral4589g00037 PK_Tyr_Ser-Thr 1.4e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4589g00037 - - gmx:100784864 1295.41