Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4589g00036 ATGACTGGGACTTTGAAAAAGATGATCCTTGCAGTGGGAAAGGGCAGTGGAATGCGTCTGATGAGAGCGCACATTTTGAGAGCATTGTGGTCTGTAAATGTAACGAGTCTTCTTGCCATGTTATCCTTGAAGGCCCAGAATCTTTCTGGTGCTATCCCGCCGGAATTTTCCAAGCTAAATCATCTCAAGAAACTGACACTGAGTCTTAACATTCTCAATGGTTCTATACCTGGCCAATGGGCTAATATGCATTTGGTTGACCTCTCGATTATGGGAAACAGATTGTCAGGCCCTTTCCCTGCAGTTCTCACGAACATCACGACTCTCCAGAACCTCCATCTGTCGTCAAACGCATTCACTGGAGAATTGCCAGTTGAACTTTCCAAATTGAAGAATTTGACTGACTTGAGGCTAAGCGACAATAACATCTCTGGGCGCATTCCTGATTTTATTGGAAGCTGGACATTAATTGAAAAGCTGCACATGGAGGGTTGCTCTCTTGAGGGGCCCATACCTTCAAGCATTTCAGCCTTGACAAGCTTAAGTGATTTGAGGATAACTGATCTAAAAGGTGGAGCCTCTGATTTCCCATCATTAAGAAACATGAAATTCATGGAGAAATTGATATTGAGGAACTGTATGATTAAAGGGGAGATCCCAGAAGATATTGGGAGAATGGAAAACCTGATAACCTTAGATCTGAGTTTCAATAACTTGACTGGAGAGATACCGGCTACTCTTGCCCAACTTAGAAGAGTAAAATTTGTATATCTTACTGGGAACAAGCTAGGAGGGACTATTCCTGAGTGGGTCCTTGAATCGAACAAGCAAGTTGATATTTCTAATAATAACTTTAGCTGGGATGGCTCAGGTCCTGTTGAATGCCTGCAAGGGAGCGTGAACATGGTCGAATGCTACTCTTCTTCTGTGGATACAGAAAGTAGAGTTAATCCATGCATGAAAAGGAATTTCCCATGTCCTGCTTCCACCGGGCAATATCATTATTCATTTCATGTTAATTGTGGTGGTGAGGAAGCCAATGTCAATGATACAATATATGAATCTGACATAGAAAAAAGAGGTGCTGCAGTGTTTTACTCCACCCAGAACTGGGCGCTTAGCAGCACAGGGGACTTCATGGACAATCATCAGAACTCTGATAACTACATTCAGACCAATACTTCTACACTTCTGAATGTCTCCGTCGTCGATTCACAACTATACACAACAGCTCGCATATCTCCTCTTTCTCTCACATACTATGGACTTTGTCTCTTAAATGGAAACTATACTGTGAAGCTTCACTTCGCGGAGATTTTGTTCTTGAATGATAGATCATATTACTGTCTTGGAAGGAGGATATTTGATGTCTACATCCAGGGGAATTTGGTCCTGAAAGACTTCAATATAGAAAGTGAAGCTGGTGGTACTGGGAAGCCAGTTGTGAAGACATTCAATACTACAGTCACCCGACATACCCTGAAAATTCACTTCTACTGGGCTGGAAAGGGCACAACAGACATACCACGAAGAGGATATTATGGACCTCTGGTGTCTGCTATATCTGTGTATCCTAATTTCAAACCTCCATCCGGGGATGGAAAGAGAATTTACATCGTGGTGGGCACAATCATTGCTGTTGTAGTTCTTGTTCTCCTGGTCTTGAGCGTCATGAAGTGGAAGGGCTGGCTAGGAGGCAATGACTCTGTATACAAAGATCTTAGAGGTTTAGATCTGCAGATGGGATTATTTACTTCAAGACAAATCAAAGCAGCAACTGAAAACTTCAATGCAGCCAACAAAATTGGGGAAGGTGGATTTGGCTCTGTTTACAAGGGTCTACTGCCAGATGGCACAGTAATTGCAGTAAAGCAGCTCTCCTCAAAATCTACACAAGGAATCCGTGAATTTGTTAATGAGTTAGGAATGATATCTGGGCTTCAACATCCCAATCTTGTTAAGCTTTATGGATGTTGTGTGGAAGGAGACCAGTTAATGCTGGTATATGAGTATATGGAAAACAATTGTCTATCTCGTTTTCTTTTTGGGAAGGATTCTGGCCGCCGAGTGCTATTGGACTGGCCAACTCGGAGGAAAATTTGCCTTGGCATAGCTAGAGCTTTGGCTTATCTCCACGAAGAGTGCGTGATTAAAATCATACACAGGGATATAAAAACAAGTAATGTGTTGCTTGATAAGGATTTTAATGCTAAGATTTCAGACTTTGGTTTTGCAAAACTCAATGTAGATGAAAATTCCCATGTTAGCACTCGCATTGCAGGAACTATAGGTTATATGGCTCCTGAATATGCAATGCGTGGTCATCTAACTGATAAAGCTGACGTTTATAGTTTCGGGGTCGTTGCATTGGAAATTGTCAGTGGAAAGAGTAATACAAATTTCAGACTCAGTGAGGAATTCATTTTCCTCCTTGATTGGGCCAATGTTTTGAAAGAGAACGGAAGACTACTAGAGCTGGTCGATCCAGATTTGGGTTCAGAATACTCAACGGAGGAGGCCATGGTAATTCTAAACGTGGCACTCTTGTGTACCAATGCATCTCCTGCGCTTAGGCCAACAATGTCTCAAGTTCTGAACATGCTTGAAGGAAGAAGTAACATGGAGGATCTACTTTCTGATCCAGGACATCAAGCAGCTAATTTCAAATATGAGGCCCTAAGAAGTCACTTCTCTGAGAATCTGAGCCTCCGAGAAAGCATGTCAATTCATGGTCAATGCCCTTATTCCTCTAGTTCAGGCGTTGAAGTAGAAGAGAAGCACCTTCTTGTACGTGCTGGAGCAGACACAACTAAAGCAGACCAGTGA 2826 0.4236 MTGTLKKMILAVGKGSGMRLMRAHILRALWSVNVTSLLAMLSLKAQNLSGAIPPEFSKLNHLKKLTLSLNILNGSIPGQWANMHLVDLSIMGNRLSGPFPAVLTNITTLQNLHLSSNAFTGELPVELSKLKNLTDLRLSDNNISGRIPDFIGSWTLIEKLHMEGCSLEGPIPSSISALTSLSDLRITDLKGGASDFPSLRNMKFMEKLILRNCMIKGEIPEDIGRMENLITLDLSFNNLTGEIPATLAQLRRVKFVYLTGNKLGGTIPEWVLESNKQVDISNNNFSWDGSGPVECLQGSVNMVECYSSSVDTESRVNPCMKRNFPCPASTGQYHYSFHVNCGGEEANVNDTIYESDIEKRGAAVFYSTQNWALSSTGDFMDNHQNSDNYIQTNTSTLLNVSVVDSQLYTTARISPLSLTYYGLCLLNGNYTVKLHFAEILFLNDRSYYCLGRRIFDVYIQGNLVLKDFNIESEAGGTGKPVVKTFNTTVTRHTLKIHFYWAGKGTTDIPRRGYYGPLVSAISVYPNFKPPSGDGKRIYIVVGTIIAVVVLVLLVLSVMKWKGWLGGNDSVYKDLRGLDLQMGLFTSRQIKAATENFNAANKIGEGGFGSVYKGLLPDGTVIAVKQLSSKSTQGIREFVNELGMISGLQHPNLVKLYGCCVEGDQLMLVYEYMENNCLSRFLFGKDSGRRVLLDWPTRRKICLGIARALAYLHEECVIKIIHRDIKTSNVLLDKDFNAKISDFGFAKLNVDENSHVSTRIAGTIGYMAPEYAMRGHLTDKADVYSFGVVALEIVSGKSNTNFRLSEEFIFLLDWANVLKENGRLLELVDPDLGSEYSTEEAMVILNVALLCTNASPALRPTMSQVLNMLEGRSNMEDLLSDPGHQAANFKYEALRSHFSENLSLRESMSIHGQCPYSSSSGVEVEEKHLLVRAGADTTKADQ 941
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4589g00036 941 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 196 288 - -
Pral4589g00036 941 SUPERFAMILY Protein kinase-like (PK-like) 581 870 IPR011009 -
Pral4589g00036 941 Gene3D - 333 526 - -
Pral4589g00036 941 Pfam Protein tyrosine and serine/threonine kinase 599 868 IPR001245 GO:0004672|GO:0006468
Pral4589g00036 941 SMART serkin_6 596 868 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4589g00036 941 Gene3D Phosphorylase Kinase; domain 1 569 671 - -
Pral4589g00036 941 Pfam Malectin domain 336 521 IPR021720 -
Pral4589g00036 941 ProSitePatterns Protein kinases ATP-binding region signature. 602 624 IPR017441 GO:0005524
Pral4589g00036 941 FunFam Putative LRR receptor-like serine/threonine-protein kinase 672 880 - -
Pral4589g00036 941 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 40 905 - -
Pral4589g00036 941 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 30 123 - -
Pral4589g00036 941 FunFam Putative LRR receptor-like serine/threonine-protein kinase isoform A 124 190 - -
Pral4589g00036 941 SUPERFAMILY L domain-like 34 286 - -
Pral4589g00036 941 Gene3D Ribonuclease Inhibitor 194 321 IPR032675 -
Pral4589g00036 941 Gene3D Ribonuclease Inhibitor 22 193 IPR032675 -
Pral4589g00036 941 Gene3D Transferase(Phosphotransferase) domain 1 672 886 - -
Pral4589g00036 941 ProSiteProfiles Protein kinase domain profile. 596 878 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4589g00036 941 FunFam probable LRR receptor-like serine/threonine-protein kinase At1g53430 566 671 - -
Pral4589g00036 941 CDD STKc_IRAK 602 870 - -
Pral4589g00036 941 ProSitePatterns Serine/Threonine protein kinases active-site signature. 719 731 IPR008271 GO:0004672|GO:0006468
Pral4589g00036 941 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 334 526 - -
Pral4589g00036 941 Pfam Leucine Rich Repeat 228 248 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4589g00036 Pral-Chr4589 274708 285717 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4589g00036 136 926 Receptor kinase-like Gene Family AT1G07650 60.025 0.0 934
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pral4589g00036 PK_Tyr_Ser-Thr 1.3e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4589g00036 - - gmx:100784864 1239.94