Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4589g00025 ATGGACGTCGCCAATAAGTCCCAAAGTCGGTTCACGCTGGGCCGGCAATCCTCTAAGGCGCCGGAACGCCGCCACTCCTGCGATGACATTGGGTCGGAGGCGTTGGACTCGAGTGTGAGGTTGATGTATTTGGCGAACGAAGGGGATTTGGATGGAATCAAGGAGCTCTTGGACTCTGGAAGTGATGTCAATTTCAGAGATATTGATGGCCGCACCGCTTTGCACGTCGCCGCGTGTCAGGGTCTCACCGATGTCGTTGAAATGTTAATCCAAAGGGGTGCTGAGGTCGACCCTAAGGACCGGTGGGGCAGCACGCCTCTAGCGGATGCAATGTACTACAAAAATCATGATGTTGTAAAAATTTTGGAGAAACATGGAGCAAAACCTCCGATGGCTCCCATGCATGTCCAAAATAGTCGTGAAGTCCCAGAATATGAGATTAGCCCTTCTGAACTTGATTTCACAAATAGTGTTCGCATAACAAAGGGAACTTTTCGTGATGCATTATGGCGTGGCACCCATGTTGCTGTCAAAACACTTGGGGAGGAAGTTCTAACTGATGATGACAAAGTAAAAGCATTTCATGATGAGCTTGCGTTACTTCAAAAAATACGGCATCCAAATGTTGTCCAATTTTTAGGTGCTGTAACACAGAGCACCCCAATGATGATTGTCACAGAATATCTACCTCAGGGAGATCTTCGTGCCTACTTGAAAAGGAGAGGTGCATTAAAACCAATAACGGCTGTGAAGTTTGCACTTGACATTGCAAGGGGAATGAACTATTTGCATGAACGTAAACCAGAAGCAATTATACACCGAGATCTTGAACCTTCAAATATACTGCGGGATGATTCTGGGCATCTGAAAGTTGCAGACTTCGGGGTTAGCAAGTTGCTCAAAGTTGCAAAAACTGTCAAAGAAGACAAACCTGTGACTAGCGAGGATACTTCTTGGCGCTATGTTGCTCCAGAGGTCTATAAAAATGAGGAGTATGACACCAAAGTAGATGTCTTTTCATTCGCTCTAATATTGCAGGAGATGGTTGAAGGTTGTCCACCATTTCGTGCAATGCCGGAAAAAGAAGTTCCTAAAGCATATGTTGCAAATGAGCGTCCACAGTTCAAGGCCTCATCTAAGGTTTATGCGCATGGGCTAAAAGAGTTAATTGAGGAATGTTGGGATAAAGAACCACACAGGAGACCAACGTTTCGACAAGTAATTGAGAGATTGGAAAGCATCAGCAGCCATTTTGCACGTGAAAAACGCTGGGAGGATTGTACCTCTAGATGCTTCCCAAATATGAGGGCCTTGTTTCAGCGGAATCGGACGAATCCAGGAAGCCGATCATCTCGGTTGATGACCAGATGA 1371 0.4581 MDVANKSQSRFTLGRQSSKAPERRHSCDDIGSEALDSSVRLMYLANEGDLDGIKELLDSGSDVNFRDIDGRTALHVAACQGLTDVVEMLIQRGAEVDPKDRWGSTPLADAMYYKNHDVVKILEKHGAKPPMAPMHVQNSREVPEYEISPSELDFTNSVRITKGTFRDALWRGTHVAVKTLGEEVLTDDDKVKAFHDELALLQKIRHPNVVQFLGAVTQSTPMMIVTEYLPQGDLRAYLKRRGALKPITAVKFALDIARGMNYLHERKPEAIIHRDLEPSNILRDDSGHLKVADFGVSKLLKVAKTVKEDKPVTSEDTSWRYVAPEVYKNEEYDTKVDVFSFALILQEMVEGCPPFRAMPEKEVPKAYVANERPQFKASSKVYAHGLKELIEECWDKEPHRRPTFRQVIERLESISSHFAREKRWEDCTSRCFPNMRALFQRNRTNPGSRSSRLMTR 456
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4589g00025 456 Pfam Ankyrin repeats (3 copies) 41 129 IPR002110 GO:0005515
Pral4589g00025 456 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 97 421 - -
Pral4589g00025 456 FunFam Integrin-linked protein kinase family 22 145 - -
Pral4589g00025 456 ProSiteProfiles Ankyrin repeat region circular profile. 69 101 - -
Pral4589g00025 456 FunFam Os01g0748600 protein 140 431 - -
Pral4589g00025 456 MobiDBLite consensus disorder prediction 1 16 - -
Pral4589g00025 456 ProSiteProfiles Ankyrin repeat profile. 69 101 IPR002110 GO:0005515
Pral4589g00025 456 FunFam serine/threonine-protein kinase STY46-like 147 230 - -
Pral4589g00025 456 SMART ANK_2a 69 98 IPR002110 GO:0005515
Pral4589g00025 456 SMART ANK_2a 102 131 IPR002110 GO:0005515
Pral4589g00025 456 SMART ANK_2a 36 65 IPR002110 GO:0005515
Pral4589g00025 456 Gene3D - 4 144 IPR036770 -
Pral4589g00025 456 MobiDBLite consensus disorder prediction 1 29 - -
Pral4589g00025 456 CDD STKc_MAP3K-like 168 411 - -
Pral4589g00025 456 SUPERFAMILY Ankyrin repeat 40 132 IPR036770 -
Pral4589g00025 456 Pfam Protein tyrosine and serine/threonine kinase 161 411 IPR001245 GO:0004672|GO:0006468
Pral4589g00025 456 ProSiteProfiles Ankyrin repeat profile. 36 68 IPR002110 GO:0005515
Pral4589g00025 456 ProSiteProfiles Protein kinase domain profile. 154 414 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4589g00025 456 PIRSF ILK 2 432 - -
Pral4589g00025 456 SUPERFAMILY Protein kinase-like (PK-like) 170 432 IPR011009 -
Pral4589g00025 456 Gene3D Transferase(Phosphotransferase) domain 1 145 420 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4589g00025 Pral-Chr4589 224815 231463 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4589g00025 8 434 MAP Kinase Kinase Kinase AT4G18950 67.972 0.0 600
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-5 Pral4589g00025 PK_Tyr_Ser-Thr 4.7e-56 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4589g00025 - - gmx:100795964 752.666