LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Pral4584g00003	ATGACATCTTTAATTAGCTTTAGAGGGGAAGACACTCGTGACAGTTTCTCTAGTTATCTCTATGAAGCACTATGTGATGCAAACATTCAAACTGTTATGGATCACAAGCTCCATAAAGGAGAGCATTTCTCACCAATTCTTCTGAAAACAATAGAGGAATCAGAGATATCTTTGATTATTTTCTCCAAACATTATGCTTCTTCAACATGGTGTATGGATGAGCTCGTTCATATTATGAAATGCAGGGATAAATACCAAAGGTTTGTTATCCCTATTTTCTATGATGTAGATGCATCAAATGTTCGCAAACAAAATGCAAGATTTGGAGATGGATTTGTGGAGTTGAAGCAGAGATTTAAACACAACCAAGAAAAAGTGCAAGAGTGGACAAATGCTTTGATCCAATCAGCAAATCTGTCTGGGTGGGATTCAAAGAATTTCAGGCCTGAATCCGAACTTGTCAAAAAGATTGTCAAAGATGTTTTGAGCAAATTGAAGCGCAAGTCATCCATTCACATGGAAGGCCTGGTTGGGATCAATCATCAGATTCAGAAAGTTGAAGAGTTAGTAAGTGAAGCTCGCACTGTGGGAATATGGGGCATGGGTGGTATTGGCAAGACCACTCTTGCTAGGGCCGTATTTGACAGATTGAAGCCAGAGTTTGAAGCTCTCTGCTTTGCTAAAGATGTGAAACAACAGCTGGCGGAAAGGAATGGATTGGATGAATTGCTAAAAAAAAGCCTTAAAGAATTATTAAAAGATGACGATATTAATGCTTACGATTTAAGATCCGCTTCTGTCAGGACAAGGCTTCAGCGTAAAAAAATTCTTCTCGTACTTGATGATGTGGACAATTTTATAACAGCTGAAGATTTAATCAAAGCATGTAATTGGTTTGGGGAAGGAAGTAGAATTATTATCACATCGAGAGATATGCAAGTGCTTAAAAATACTTCTGCTTCTGCATCTCCAGCAACATATCAAGTTCCGGAATTGGATCCCCATCATTCCCTTCATCTCTTTAGTTTGAATGCTTTCAAGCAAAATCAGCCATTCGAAAACTACTTGGAGCTATCAAAGCGGGTAGTTGATTATTGTAAAGGAAATCCTTTAGCTCTGAAAGTGTTGGGTGGCTATCTCCATGATAGAGGAAAAGAAGTGTGGGAAAATATTGACATGAGTGAACTTAAAGACAGATCCCTCATCTTTGTTTCTGGATGTGGTAATATTCAGATGCATGCTCTACTAACGAATATGGGTCTTGAAATTTCAAAGCAACAATTAAAATCTGATCCTGAAAATCCCATTCGGCTGTCGGGGCATGAGAATATTTATCGTTATTTTTCCAACAATGACAAGGGAATTGAGGCAATTCGATGCATGTCATTGGATGCAAGCAAGATAGAAAGCATTACATTAACGGCTAGTCATTTTCGAAAGATGCATTATTTAATGTCCCTTAAAGTTTACAAGTCAGATCGGGGAAAGCGTTCAAAGTTAAATATTTGTGAAGATTTGGATTATCTCTCAAAAGAATTAAGGTTTCTTAGTTGGGAAGGATATCCACTACCATCAGTGCCATTACAATTTTGTGCTAAGAATCTTATTAAGCTTAATTTGCCAAAGAGTAATATCCAGCAGCTTTGGAATGGATACCAGCAATTTCCAAACCTGGAGGAAATAAGTCTATGGGATTCAAAAAATCTTAGGGCACTCCCGGATTTGTCTCAAGCCCCTAAGATTGAACGGATAATTCTTCGTGGTTGTGTGAATTTGGGTCAAATCCATTCTTCAACTGTCCCGGAAAAGGATATCAATTTATTTATAAAAGATTGTGGGCCAATGCAAATAAATGTTGGGGGCAGTATGCACGAGAGAAGTTCATCAAGGTTAGTGATTGTGCACAATTCTTTGGATCTTGCCGATTTGACATTCAATAAAGTGACAATGAAGGTGATGTTATACGGCAAGATGATATGTGGTGTTGGATTTAAGCATGTGAGAATGCCATTGAAAGAGATGGCAGAATTCATGAGAATGGGAATACAAAGTTTGGCGACTTTACTTCCATTTGTGAGGAGAGTTAAATGGTTAGAGAGTCCAATTGAGTTTGGGCATGATTTCAAGCAACATTATACCTATGATGTTAATCATTATTACAATGGAAATACATACTTTAGTATTGCTGTGTGGGTGAGGAGTGATGGAGAAGAAAGGGGGGTAGAAGATGATGAAGAAGAGGATGAGGATGAGAGAGAAATGATTAGTGAGAATGAAAGAGAAATGAACAGTAAAGGTGATCAAGTAGTAGAGACGGAATTATTATTAATGGAAGATGAACAAGAAGAGGATGATGATGAGAATGATAGTAAGAGTGCTACCACATTAATAATAACAACACTTATTCTCAACACCATCCCTTGCTGGTCATTATTGGTTCGAGTGACATTAAAAGAGAGTGATATTATTATTGGGAATAATGCAAGTTGCAGCAGCATCCCTCAAGTTTCAATTATCCTCAAATCACTTAATGAAGATTGCAGAAGGCGGATTCAGCCTCTCTTAGTAGTACAACTCTCTTCACCAATATCCCCTTTACGTCATCATTCTTTCGGAGTCTTTTATAACTACTTGGAGAGGATGCCACACGATCCTTGTTTTCTTTGTTTCCGCAGCAAATACTTGTCAAACAATCATTTCGATGATCATGATCTAGTTGTTTACTATGCGGAGCATTATTGA	2742	0.3775	MTSLISFRGEDTRDSFSSYLYEALCDANIQTVMDHKLHKGEHFSPILLKTIEESEISLIIFSKHYASSTWCMDELVHIMKCRDKYQRFVIPIFYDVDASNVRKQNARFGDGFVELKQRFKHNQEKVQEWTNALIQSANLSGWDSKNFRPESELVKKIVKDVLSKLKRKSSIHMEGLVGINHQIQKVEELVSEARTVGIWGMGGIGKTTLARAVFDRLKPEFEALCFAKDVKQQLAERNGLDELLKKSLKELLKDDDINAYDLRSASVRTRLQRKKILLVLDDVDNFITAEDLIKACNWFGEGSRIIITSRDMQVLKNTSASASPATYQVPELDPHHSLHLFSLNAFKQNQPFENYLELSKRVVDYCKGNPLALKVLGGYLHDRGKEVWENIDMSELKDRSLIFVSGCGNIQMHALLTNMGLEISKQQLKSDPENPIRLSGHENIYRYFSNNDKGIEAIRCMSLDASKIESITLTASHFRKMHYLMSLKVYKSDRGKRSKLNICEDLDYLSKELRFLSWEGYPLPSVPLQFCAKNLIKLNLPKSNIQQLWNGYQQFPNLEEISLWDSKNLRALPDLSQAPKIERIILRGCVNLGQIHSSTVPEKDINLFIKDCGPMQINVGGSMHERSSSRLVIVHNSLDLADLTFNKVTMKVMLYGKMICGVGFKHVRMPLKEMAEFMRMGIQSLATLLPFVRRVKWLESPIEFGHDFKQHYTYDVNHYYNGNTYFSIAVWVRSDGEERGVEDDEEEDEDEREMISENEREMNSKGDQVVETELLLMEDEQEEDDDENDSKSATTLIITTLILNTIPCWSLLVRVTLKESDIIIGNNASCSSIPQVSIILKSLNEDCRRRIQPLLVVQLSSPISPLRHHSFGVFYNYLERMPHDPCFLCFRSKYLSNNHFDDHDLVVYYAEHY	913

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Pral4584g00003	913	PANTHER	LEUCINE-RICH REPEAT-CONTAINING PROTEIN	5	626	IPR044974	GO:0006952
	Pral4584g00003	913	Gene3D	-	332	423	IPR042197	-
	Pral4584g00003	913	Gene3D	-	4	163	IPR035897	-
	Pral4584g00003	913	FunFam	Disease resistance protein (TIR-NBS-LRR class)	2	167	-	-
	Pral4584g00003	913	SUPERFAMILY	Toll/Interleukin receptor TIR domain	5	142	IPR035897	-
	Pral4584g00003	913	ProSiteProfiles	TIR domain profile.	1	165	IPR000157	GO:0007165
	Pral4584g00003	913	SUPERFAMILY	P-loop containing nucleoside triphosphate hydrolases	169	391	IPR027417	-
	Pral4584g00003	913	Pfam	NB-ARC domain	192	389	IPR002182	GO:0043531
	Pral4584g00003	913	MobiDBLite	consensus disorder prediction	739	755	-	-
	Pral4584g00003	913	Gene3D	Ribonuclease Inhibitor	424	612	IPR032675	-
	Pral4584g00003	913	SMART	till_3	5	139	IPR000157	GO:0007165
	Pral4584g00003	913	SUPERFAMILY	RNI-like	455	598	-	-
	Pral4584g00003	913	Pfam	TIR domain	5	172	IPR000157	GO:0007165
	Pral4584g00003	913	Gene3D	-	164	323	IPR027417	-
	Pral4584g00003	913	MobiDBLite	consensus disorder prediction	737	766	-	-
	Pral4584g00003	913	PRINTS	Disease resistance protein signature	553	569	-	-
	Pral4584g00003	913	PRINTS	Disease resistance protein signature	195	210	-	-
	Pral4584g00003	913	PRINTS	Disease resistance protein signature	270	284	-	-
	Pral4584g00003	913	PRINTS	Disease resistance protein signature	366	380	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Pral4584g00003	Pral-Chr4584	46731	60088	Dispersed/Tandem

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Pral4584g00003	8	589	WRKY Transcription Factor Family	AT4G12020	26.923	2.04e-53	201

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Pral4584g00003	-		-	pcin:129286024	710.294