Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4583g00004 ATGGATGCAACCATTGCTTTAATGCTCATAGAAGCTGTATTGATTTTGCTGGCTATACTAATTTATAAAGCTGTCAGATTAATCTCTCCACTTCATACTATCCGTCCTATTTCTATTCATGAGAGTTCTAAAGATGATGTTGATTCGATTCCCATGGTTTGCTCTCCTTCTAATATCATTGTTGCTCCTCCTACAACCAATTATGACGTCTTTCTTAGCTTTAGAGGGAAAGACACTCATGACAGTTTCTCAAGTTATCTCTATGAAGCACTTTGCGATGCAAACCTTCAAACTTTTATGGGTCACAAGCTCCACAAAGGAGACCATATCTCACCCGTTCTTTTGAAAACAATAGAGGAATCAGAGATATCTTTGATTATTTTCTCCAAAGATTATGCATCTTCAACATGTTGTATGGACGAGCTTGTTCATATTATGAGCTGTAGGGATAAATACCAAAGAGTTGTCATCCCTATTTTCTATGACATAGATCCATCAAATGTTCGCAAACAAAATGGAAGTTTTGGAGATGGATTTGCTAAGATTAAGCAGAGATTTAGCCACAACCAAGAAAAAGTGCAAAATTGGACAAATGCTTTGATCCAATCAACAAATCTCTCTGGGTGGGATTCAAAGAATATCAGGCCTGAATCCAAACTTATTAAGAAGATTGTCAAAGATATTTTGAGCAAATTGAATGGCAAGTCGTCCTTTCATTTTGAAGGATTAGTTGGGATTGATCATCATATTCAGAAGATTGAAGAGCTATTGGGTAAAGCTCGCATTGTGGGAATATGGGGTATGGGTGGTATAGGTAAGAGTACTCTTGCTAGAGTTGTATTCCACGAGTTGAAAGCACAGTTTGAAGCTTTCTCCTTTGTGGAAGATGTAAGGGAACAACTAGCAATAATTGGGTTTGACAGGTTACAAAAAGAATGTCTCAAAGAATTAATAAAAGATAAGGACATTAATGTCTTTGATATAGAATCCTCTTTTGTGAGAAGTAGGCTTCAACGCAGAAAAGTTCTTCTGATACTTGATGATGTGGACAATTCACTACCGGTTGAAGATTTAACTGAAATGTATCGTTGGTTTGGAGAAGGAAGTTGA 1110 0.3667 MDATIALMLIEAVLILLAILIYKAVRLISPLHTIRPISIHESSKDDVDSIPMVCSPSNIIVAPPTTNYDVFLSFRGKDTHDSFSSYLYEALCDANLQTFMGHKLHKGDHISPVLLKTIEESEISLIIFSKDYASSTCCMDELVHIMSCRDKYQRVVIPIFYDIDPSNVRKQNGSFGDGFAKIKQRFSHNQEKVQNWTNALIQSTNLSGWDSKNIRPESKLIKKIVKDILSKLNGKSSFHFEGLVGIDHHIQKIEELLGKARIVGIWGMGGIGKSTLARVVFHELKAQFEAFSFVEDVREQLAIIGFDRLQKECLKELIKDKDINVFDIESSFVRSRLQRRKVLLILDDVDNSLPVEDLTEMYRWFGEGS 369
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4583g00004 369 ProSiteProfiles TIR domain profile. 66 232 IPR000157 GO:0007165
Pral4583g00004 369 FunFam Disease resistance protein (TIR-NBS-LRR class) 64 234 - -
Pral4583g00004 369 PRINTS Disease resistance protein signature 336 350 - -
Pral4583g00004 369 PRINTS Disease resistance protein signature 262 277 - -
Pral4583g00004 369 Gene3D - 239 368 IPR027417 -
Pral4583g00004 369 SUPERFAMILY Toll/Interleukin receptor TIR domain 64 209 IPR035897 -
Pral4583g00004 369 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 234 358 IPR027417 -
Pral4583g00004 369 Pfam NB-ARC domain 253 351 IPR002182 GO:0043531
Pral4583g00004 369 SMART till_3 67 206 IPR000157 GO:0007165
Pral4583g00004 369 Pfam TIR domain 67 244 IPR000157 GO:0007165
Pral4583g00004 369 Gene3D - 65 238 IPR035897 -
Pral4583g00004 369 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 68 369 IPR044974 GO:0006952
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4583g00004 Pral-Chr4583 94109 96472 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4583g00004 65 369 WRKY Transcription Factor Family AT4G12020 27.885 3.45e-31 123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4583g00004 - - pcin:129286024 476.478