Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4582g00019 ATGGGAACTCCACAGCCAGAAGAGCTTCTCAAGAAGATCGAGGACCTCGAGGTGGGTCACGCACACCTCAAGCAAGAAATGTCCAAGCTCAAGCTCTCGGGCGCAAGCGATGCTCGGGCCGAGCAGAGCCATCATCGCCAGAGGTCGCACTCGATATCGCCGCAGCGTTCGAGATTGGGTGCGTCCAGGAGGAGAGCTGGAGGCGGCGGATTCGATGGACCGGCTTCGTGGAAGAAAGGTTCGACCTCGTTTAAACATTCATCACCGCTTCAGAGGGAAAGCCGTGGTAGTGATCCTCAAAGTGATGGAGAAGGTGGCGTCGGAAGAGGCCCTTCATCTGTGAATTTTACTGATAAGCAATATCTCAATATTTTGCAGTCAATGGGGCACTCTGTTCACATATTGGATCTTAACGGTCGTATAATATGCTGGAACCGGAGTGCTGAACATCTATATGGTTATTCAGCGGAAGAAGCCCTTGGTAAGGATGGCATTGAGCTGCTTGTAGACCCCCGTGATTTTGCTCTTGCCGATGATATAGTCACCCGGGTCATTATGGGAGAGAAATGGCTTGGGCACTTCCCTGCCAAAAATAAGATGGGAGAGAAGTTTTTGACTGTAGCTACTAATAATCCTTTATATGACGATGACGGACGTTTGATTGGCGTTATTTGCGTCTCAAGTGATTCACGACCCTTCCTTGAAGTGAGAGTTCCGTTCTCAGGAGTAAAGCAATTTGAAACAGGTTCAGGCTCCAACAATCTTAGAAGTAGCATCACAAATAAACTTGGTCTCGATTCTCAACAGCCTCTTCAAGTTGGTATAGCATCAAAAATTACAAATTTGGCCTCCAAGGTAAGTAACAAAGTGAAGTCAAGAATCCGAACAGGAGATAATAATGTGGATCGTGAAGGTGGGAGTGGTGAAAGTCATCATTCTGAGCCTGGCTTCTCAGAGTCGGTTCCTTCAGACCAGAGAGAAGATGCTAATTCAAGTGGAGCTAGCACACCCAGGGGAGATGTGCCCCCCTCTCCCTTTGGCGTTATTTCTCACACAGAAGACAAAAGTCAAGGAAAAAATTTAAGAGATTCTGGTGATGAGGGTGAAGGAAAACCTATGCATAAAGTCTTAACTTCCAAGGCTGAAGCATGGATTCAAAGGAAAACGATATCATGGCCATGGAAAGCAAATGAGCGGGATGGGTCAGAGGGAAGGAACGTCCGTGTTGGTTGGCCGTGGTTGCAGAATGATCAAGAAAATGAGCCAGCTCAGCGGAAGCCTCCTTCTTCTTGTGTGAGGCCAGAAAGTCAGGCAGGAGAAGGTAATCGACCTGTTACTAATGAAGCATCAGGATCCTGGTCCTCCTTCAATGTTAACAGCACAAGTAGTGCAAGCAGCTGTGGGAGTGGCAGCAGTGCTGTCAATAATAAATTGGACATGGATACTGATTGTTTGGATTATGAAATCTTGTGGGAAGACCTGACAATTGGAGAACAAATTGGGCAAGGATCATGTGGAACTGTGTATCATGCTCTGTGGTATGGATCAGATGTTGCGGTCAAGGTATTCTCCAAGCAAGAATATTCAGATGATGTAATTATGTCCTTCAGACAAGAGGTATCTGTTATGAAGAGACTTAGGCATCCAAATGTCCTTCTGTTCATGGGGGCAGTAACTTCACCTCAACGTCTCTGCATTGTGACTGAGTTTCTCCCACGTGGAAGCTTGTTTCGCTTACTCCAGAGAAACACAGCCAAACTTGACTGGAGACGGCGTGTCCATATGGCTTTAGATATTGCTCGGGGTGTAAACTATCTTCATCATTGTAGCCCACCTATCATTCATCGAGATTTGAAATCTTCAAATCTTCTAGTTGACAAGAACTGGACTGTTAAGGTCGGTGATTTTGGCCTTTCGCGCCTCAAGCATGAAACATATCTCACAACAAAGACTGGAAAGGGCACGCCTCAATGGATGGCACCAGAAGTTCTTCGTAATGAGCCATCTGATGAGAAGTCTGATGTATACAGCTTTGGAGTGATATTGTGGGAACTTACAACTGAGAAGATCCCTTGGGAGAGTCTCAACTCAATGCAGGATACTTGCAGGTGA 2112 0.4635 MGTPQPEELLKKIEDLEVGHAHLKQEMSKLKLSGASDARAEQSHHRQRSHSISPQRSRLGASRRRAGGGGFDGPASWKKGSTSFKHSSPLQRESRGSDPQSDGEGGVGRGPSSVNFTDKQYLNILQSMGHSVHILDLNGRIICWNRSAEHLYGYSAEEALGKDGIELLVDPRDFALADDIVTRVIMGEKWLGHFPAKNKMGEKFLTVATNNPLYDDDGRLIGVICVSSDSRPFLEVRVPFSGVKQFETGSGSNNLRSSITNKLGLDSQQPLQVGIASKITNLASKVSNKVKSRIRTGDNNVDREGGSGESHHSEPGFSESVPSDQREDANSSGASTPRGDVPPSPFGVISHTEDKSQGKNLRDSGDEGEGKPMHKVLTSKAEAWIQRKTISWPWKANERDGSEGRNVRVGWPWLQNDQENEPAQRKPPSSCVRPESQAGEGNRPVTNEASGSWSSFNVNSTSSASSCGSGSSAVNNKLDMDTDCLDYEILWEDLTIGEQIGQGSCGTVYHALWYGSDVAVKVFSKQEYSDDVIMSFRQEVSVMKRLRHPNVLLFMGAVTSPQRLCIVTEFLPRGSLFRLLQRNTAKLDWRRRVHMALDIARGVNYLHHCSPPIIHRDLKSSNLLVDKNWTVKVGDFGLSRLKHETYLTTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELTTEKIPWESLNSMQDTCR 703
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4582g00019 703 MobiDBLite consensus disorder prediction 440 454 - -
Pral4582g00019 703 SUPERFAMILY PYP-like sensor domain (PAS domain) 123 226 IPR035965 -
Pral4582g00019 703 MobiDBLite consensus disorder prediction 355 376 - -
Pral4582g00019 703 Pfam PAS fold 120 227 IPR013767 GO:0006355
Pral4582g00019 703 SMART serkin_6 494 703 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4582g00019 703 Gene3D Transferase(Phosphotransferase) domain 1 572 703 - -
Pral4582g00019 703 Gene3D PAS domain 130 232 - -
Pral4582g00019 703 Pfam Protein tyrosine and serine/threonine kinase 494 695 IPR001245 GO:0004672|GO:0006468
Pral4582g00019 703 MobiDBLite consensus disorder prediction 80 96 - -
Pral4582g00019 703 MobiDBLite consensus disorder prediction 24 114 - -
Pral4582g00019 703 CDD STKc_MAP3K-like 500 699 - -
Pral4582g00019 703 MobiDBLite consensus disorder prediction 290 380 - -
Pral4582g00019 703 SMART pas_2 119 186 IPR000014 -
Pral4582g00019 703 ProSiteProfiles Protein kinase domain profile. 494 703 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4582g00019 703 NCBIfam PAS domain S-box protein 119 229 IPR000014 -
Pral4582g00019 703 Gene3D Phosphorylase Kinase; domain 1 487 571 - -
Pral4582g00019 703 MobiDBLite consensus disorder prediction 412 454 - -
Pral4582g00019 703 SUPERFAMILY Protein kinase-like (PK-like) 482 698 IPR011009 -
Pral4582g00019 703 CDD PAS 132 229 IPR000014 -
Pral4582g00019 703 MobiDBLite consensus disorder prediction 291 310 - -
Pral4582g00019 703 FunFam PAS domain-containing protein tyrosine kinase 487 571 - -
Pral4582g00019 703 MobiDBLite consensus disorder prediction 313 338 - -
Pral4582g00019 703 ProSitePatterns Serine/Threonine protein kinases active-site signature. 613 625 IPR008271 GO:0004672|GO:0006468
Pral4582g00019 703 ProSiteProfiles PAS repeat profile. 117 188 IPR000014 -
Pral4582g00019 703 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 114 693 - -
Pral4582g00019 703 FunFam PAS domain-containing protein tyrosine kinase family protein 572 702 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4582g00019 Pral-Chr4582 145462 151128 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4582g00019 1 699 MAP Kinase Kinase Kinase AT3G06620 61.313 0.0 842
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL_CTR1-DRK-2 Pral4582g00019 PK_Tyr_Ser-Thr 9.5e-56 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4582g00019 - - qsa:O6P43_021865 1031.17