Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4582g00018 ATGGGAACTCCACAGCCAGAAGAGCTTCTCAAGAAGATCGAGGACCTCGAGGTGGGTCACGCACACCTCAAGCAAGAAATGTCCAAGCTCAAGCTCTCGGGCGCAAGCGATGCTCGGGCCGAGCAGAGCCATCATCGCCAGAGGTCGCACTCGATATCGCCGCAGCGTTCGAGATTGGGTGCGTCCAGGAGGAGAGCTGGAGGCGGCGGATTCGATGGACCGGCTTCGTGGAAGAAAGGTTCGACCTCGTTTAAACATTCATCACCGCTTCAGAGGGAAAGCCGTGGTAGTGATCCTCAAAGTGATGGAGAAGGTGGCGTCGGAAGAGGCCCTTCATCTGTGAATTTTACTGATAAGCAATATCTCAATATTTTGCAGTCAATGGGGCACTCTGTTCACATATTGGATCTTAACGGTCGTATAATATGCTGGAACCGGAGTGCTGAACATCTATATGGTTATTCAGCGGAAGAAGCCCTTGGTAAGGATGGCATTGAGCTGCTTGTAGACCCCCGTGATTTTGCTCTTGCCGATGATATAGTCACCCGGGTCATTATGGGAGAGAAATGGCTTGGGCACTTCCCTGCCAAAAATAAGATGGGAGAGAAGTTTTTGACTGTAGCTACTAATAATCCTTTATATGACGATGACGGACGTTTGATTGGCGTTATTTGCGTCTCAAGTGATTCACGACCCTTCCTTGAAGTGAGAGTTCCGTTCTCAGGAGTAAAGCAATTTGAAACAGGTTCAGGCTCCAACAATCTTAGAAGTAGCATCACAAATAAACTTGGTCTCGATTCTCAACAGCCTCTTCAAGTTGGTATAGCATCAAAAATTACAAATTTGGCCTCCAAGGTAAGTAACAAAGTGAAGTCAAGAATCCGAACAGGAGATAATAATGTGGATCGTGAAGGTGGGAGTGGTGAAAGTCATCATTCTGAGCCTGGCTTCTCAGAGTCGGTTCCTTCAGACCAGAGAGAAGATGCTAATTCAAGTGGAGCTAGCACACCCAGGGGAGATGTGCCCCCCTCTCCCTTTGGCGTTATTTCTCACACAGAAGACAAAAGTCAAGGAAAAAATTTAAGAGATTCTGGTGATGAGGGTGAAGGAAAACCTATGCATAAAGTCTTAACTTCCAAGGCTGAAGCATGGATTCAAAGGAAAACGATATCATGGCCATGGAAAGCAAATGAGCGGGATGGGTCAGAGGGAAGGAACGTCCGTGTTGGTTGGCCGTGGTTGCAGAATGATCAAGAAAATGAGCCAGCTCAGCGGAAGCCTCCTTCTTCTTGTGTGAGGCCAGAAAGTCAGGCAGGAGAAGGTAATCGACCTGTTACTAATGAAGCATCAGGATCCTGGTCCTCCTTCAATGTTAACAGCACAAGTAGTGCAAGCAGCTGTGGGAGTGGCAGCAGTGCTGTCAATAATAAATTGGACATGGATACTGATTGTTTGGATTATGAAATCTTGTGGGAAGACCTGACAATTGGAGAACAAATTGGGCAAGGATCATGTGGAACTGTGTATCATGCTCTGTGGTATGGATCAGATGTTGCGGTCAAGGTATTCTCCAAGCAAGAATATTCAGATGATGTAATTATGTCCTTCAGACAAGAGGTATCTGTTATGAAGAGACTTAGGCATCCAAATGTCCTTCTGTTCATGGGGGCAGTAACTTCACCTCAACGTCTCTGCATTGTGACTGAGTTTCTCCCACGTGGAAGCTTGTTTCGCTTACTCCAGAGAAACACAGCCAAACTTGACTGGAGACGGCGTGTCCATATGGCTTTAGATATTGCTCGGGGTGTAAACTATCTTCATCATTGTAGCCCACCTATCATTCATCGAGATTTGAAATCTTCAAATCTTCTAGTTGACAAGAACTGGACTGTTAAGGTCGGTGATTTTGGCCTTTCGCGCCTCAAGCATGAAACATATCTCACAACAAAGACTGGAAAGGGCACGCCTCAATGGATGGCACCAGAAGTTCTTCGTAATGAGCCATCTGATGAGAAGTCTGATGTATACAGCTTTGGAGTGATATTGTGGGAACTTACAACTGAGAAGATCCCTTGGGAGAGTCTCAACTCAATGCAGGTGATTGGAGCTGTTGGCTTCATGAACCAGCGGCTAGAAATTCCAAAGGATGTTGATCCCAAGTGGGCTGCTATAATTGAGAGCTGCTGGCATAGTGATCCAGCCTGCCGGCCAACGTTTCAGGAACTGCTAGAAAGGCTTCGAGAGCTGCAAAGACGTTATGCCCTTCAATTTCAAGCTGCTCGTTCTGCTGGTGTTGAAAACACTCAAAAGGAGTCCTAA 2319 0.4657 MGTPQPEELLKKIEDLEVGHAHLKQEMSKLKLSGASDARAEQSHHRQRSHSISPQRSRLGASRRRAGGGGFDGPASWKKGSTSFKHSSPLQRESRGSDPQSDGEGGVGRGPSSVNFTDKQYLNILQSMGHSVHILDLNGRIICWNRSAEHLYGYSAEEALGKDGIELLVDPRDFALADDIVTRVIMGEKWLGHFPAKNKMGEKFLTVATNNPLYDDDGRLIGVICVSSDSRPFLEVRVPFSGVKQFETGSGSNNLRSSITNKLGLDSQQPLQVGIASKITNLASKVSNKVKSRIRTGDNNVDREGGSGESHHSEPGFSESVPSDQREDANSSGASTPRGDVPPSPFGVISHTEDKSQGKNLRDSGDEGEGKPMHKVLTSKAEAWIQRKTISWPWKANERDGSEGRNVRVGWPWLQNDQENEPAQRKPPSSCVRPESQAGEGNRPVTNEASGSWSSFNVNSTSSASSCGSGSSAVNNKLDMDTDCLDYEILWEDLTIGEQIGQGSCGTVYHALWYGSDVAVKVFSKQEYSDDVIMSFRQEVSVMKRLRHPNVLLFMGAVTSPQRLCIVTEFLPRGSLFRLLQRNTAKLDWRRRVHMALDIARGVNYLHHCSPPIIHRDLKSSNLLVDKNWTVKVGDFGLSRLKHETYLTTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELTTEKIPWESLNSMQVIGAVGFMNQRLEIPKDVDPKWAAIIESCWHSDPACRPTFQELLERLRELQRRYALQFQAARSAGVENTQKES 772
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4582g00018 772 Gene3D Phosphorylase Kinase; domain 1 487 571 - -
Pral4582g00018 772 MobiDBLite consensus disorder prediction 440 454 - -
Pral4582g00018 772 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 114 752 - -
Pral4582g00018 772 FunFam PAS domain-containing protein tyrosine kinase 487 571 - -
Pral4582g00018 772 MobiDBLite consensus disorder prediction 355 376 - -
Pral4582g00018 772 CDD STKc_MAP3K-like 500 746 - -
Pral4582g00018 772 Pfam Protein tyrosine and serine/threonine kinase 494 746 IPR001245 GO:0004672|GO:0006468
Pral4582g00018 772 SUPERFAMILY Protein kinase-like (PK-like) 482 746 IPR011009 -
Pral4582g00018 772 NCBIfam PAS domain S-box protein 119 229 IPR000014 -
Pral4582g00018 772 MobiDBLite consensus disorder prediction 80 96 - -
Pral4582g00018 772 MobiDBLite consensus disorder prediction 24 114 - -
Pral4582g00018 772 Pfam PAS fold 120 227 IPR013767 GO:0006355
Pral4582g00018 772 MobiDBLite consensus disorder prediction 290 380 - -
Pral4582g00018 772 SMART pas_2 119 186 IPR000014 -
Pral4582g00018 772 Gene3D PAS domain 130 232 - -
Pral4582g00018 772 SUPERFAMILY PYP-like sensor domain (PAS domain) 123 226 IPR035965 -
Pral4582g00018 772 MobiDBLite consensus disorder prediction 412 454 - -
Pral4582g00018 772 CDD PAS 132 229 IPR000014 -
Pral4582g00018 772 MobiDBLite consensus disorder prediction 291 310 - -
Pral4582g00018 772 PRINTS Tyrosine kinase catalytic domain signature 607 625 IPR001245 GO:0004672|GO:0006468
Pral4582g00018 772 PRINTS Tyrosine kinase catalytic domain signature 568 581 IPR001245 GO:0004672|GO:0006468
Pral4582g00018 772 PRINTS Tyrosine kinase catalytic domain signature 654 664 IPR001245 GO:0004672|GO:0006468
Pral4582g00018 772 PRINTS Tyrosine kinase catalytic domain signature 673 695 IPR001245 GO:0004672|GO:0006468
Pral4582g00018 772 PRINTS Tyrosine kinase catalytic domain signature 717 739 IPR001245 GO:0004672|GO:0006468
Pral4582g00018 772 MobiDBLite consensus disorder prediction 313 338 - -
Pral4582g00018 772 ProSitePatterns Serine/Threonine protein kinases active-site signature. 613 625 IPR008271 GO:0004672|GO:0006468
Pral4582g00018 772 ProSiteProfiles PAS repeat profile. 117 188 IPR000014 -
Pral4582g00018 772 FunFam PAS domain-containing protein tyrosine kinase family protein 572 763 - -
Pral4582g00018 772 ProSiteProfiles Protein kinase domain profile. 494 749 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4582g00018 772 Gene3D Transferase(Phosphotransferase) domain 1 572 772 - -
Pral4582g00018 772 SMART serkin_6 494 754 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4582g00018 Pral-Chr4582 143212 151127 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4582g00018 1 768 MAP Kinase Kinase Kinase AT3G06620 61.783 0.0 951
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL_CTR1-DRK-2 Pral4582g00018 PK_Tyr_Ser-Thr 5.7e-68 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4582g00018 - - qsa:O6P43_021865 1144.41