Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4578g00005 ATGGCATCTGGTTTGAATTCGGGGTTATCCAAGAAAACTTCTGTTTTTGGTCTACAAGCGTGGGAATTGATGGCAATGGCTGTTGGGTTGTTCATTATAATCATTCTTGTGGTTCTATCAATATGTCTTACAAAGCGAAAGAAATCCAGAAAAATCAACAGCAGCATGCTCCCCTTTAGCCATATGTCATCAGTTTCAGAAGAGATCAAAGAGATTAGAGTTGATCAAGTTTCGGCAAATAATCATCTGCAGGATGGTTCCTTCACGAGTTTGAATGACAGGTTTAGTGACCAGGAGTCTGCAAAGGCTTTAATCCAAGTGAAGAATGGGGATAATCTCAATAATAGTCAGTCAGGCTCATTTAATCATTTAGAGAAAGATGGTGTTGGCTCTCAATCAGGCGACGACAGTGGCTCTAAGACCAATTCTTCATACAGCCCCTTGTCTGGTTTGCCTGAATTCTCTCAACTAGGCTGGGGTCACTGGTTCACATTAAGGGACCTAGAACTCGCAACAAACAGGTTTTCAAGGGACAATGTAATTGGGGAAGGTGGTTATGGAGTTGTTTATCGAGGTCAACTAGTCAACGGGAATCCTGTGGCTGTTAAGAAGATTTTCAATAATGTAGGACAGGCGGAAAAGGAATTCAGGGTGGAAGTTGAGGCTATTGGTCATGTGCGGCATAAGAACTTGGTCCGACTTCTTGGATACTGCGTTGAAGGCACTCACAGGTTGCTGGTTTATGAGTATGTTAACAACGGCAATTTAGAACAATGGCTACATGGAGCAATGCAGAAACAGGGGTATCTTACTTGGGATGCTCGGATGAAAATTCTCCTTGGGACGGCTAAAGGGTTGGCTTACTTGCATGAGGCTATTGAACCAAAGGTGGTACATCGTGATATTAAGTCAAGCAATATTTTGGTTGATGATGACTTTAATGCCAAAATATCTGACTTTGGGCTGGCTAAGTTGCTGGGTTCTGGGAAAAGTCATATCACAACTCGAGTAATGGGTACTTTTGGATATGTGGCTCCAGAATATGCTAATTCTGGCTTACTAAATGAGAAGAGTGACGTTTATAGCTTTGGTGTGTTACTCCTTGAAGCCATTACCGGAAGAGATCCTGTGGATTACAGCAGACCAGCAGATGAGGTAAATTTGGTTGACTGGCTCAAGATGATGGTAGGGAATAGGCGTTCAGAAGAGGTGGTGGACCCAAAACTTGAGACTCGCCCATCGACAAGTGCCCTTAAACGGGCTCTTTTGACTTCACTGAGGTGTGTTGATCCAGATGCCGGAAAAAGGCCAAAGATGAGTCAAGTTGTCCGCATGCTTGAATCAGAAGAATACCCTATACCTCGAGAGGATAGAAGGCGGCGAAAGAGTCAGGCAGGAATCGTGGAGAGTTCTGATACAGAAAAGAGTGACAATCCAGATAACAGGTCAAATGAGAGAAGGAACCAGAGGAAATAG 1476 0.4356 MASGLNSGLSKKTSVFGLQAWELMAMAVGLFIIIILVVLSICLTKRKKSRKINSSMLPFSHMSSVSEEIKEIRVDQVSANNHLQDGSFTSLNDRFSDQESAKALIQVKNGDNLNNSQSGSFNHLEKDGVGSQSGDDSGSKTNSSYSPLSGLPEFSQLGWGHWFTLRDLELATNRFSRDNVIGEGGYGVVYRGQLVNGNPVAVKKIFNNVGQAEKEFRVEVEAIGHVRHKNLVRLLGYCVEGTHRLLVYEYVNNGNLEQWLHGAMQKQGYLTWDARMKILLGTAKGLAYLHEAIEPKVVHRDIKSSNILVDDDFNAKISDFGLAKLLGSGKSHITTRVMGTFGYVAPEYANSGLLNEKSDVYSFGVLLLEAITGRDPVDYSRPADEVNLVDWLKMMVGNRRSEEVVDPKLETRPSTSALKRALLTSLRCVDPDAGKRPKMSQVVRMLESEEYPIPREDRRRRKSQAGIVESSDTEKSDNPDNRSNERRNQRK 491
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4578g00005 491 CDD STKc_IRAK 181 447 - -
Pral4578g00005 491 MobiDBLite consensus disorder prediction 449 491 - -
Pral4578g00005 491 Gene3D Phosphorylase Kinase; domain 1 153 250 - -
Pral4578g00005 491 PANTHER OS01G0323000 PROTEIN 5 476 - -
Pral4578g00005 491 ProSiteProfiles Protein kinase domain profile. 175 452 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4578g00005 491 FunFam Putative receptor-like protein kinase 157 250 - -
Pral4578g00005 491 ProSitePatterns Protein kinases ATP-binding region signature. 181 204 IPR017441 GO:0005524
Pral4578g00005 491 Pfam Protein kinase domain 176 444 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4578g00005 491 Gene3D Transferase(Phosphotransferase) domain 1 251 463 - -
Pral4578g00005 491 SUPERFAMILY Protein kinase-like (PK-like) 159 453 IPR011009 -
Pral4578g00005 491 FunFam Putative receptor-like serine/threonine-protein kinase 251 462 - -
Pral4578g00005 491 ProSitePatterns Serine/Threonine protein kinases active-site signature. 297 309 IPR008271 GO:0004672|GO:0006468
Pral4578g00005 491 MobiDBLite consensus disorder prediction 110 146 - -
Pral4578g00005 491 MobiDBLite consensus disorder prediction 430 491 - -
Pral4578g00005 491 SMART serkin_6 175 446 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4578g00005 Pral-Chr4578 41074 45361 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4578g00005 17 449 Trihelix Transcription Factor Family AT1G70460 41.781 1.84e-98 310
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-V Pral4578g00005 Pkinase 1.5e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4578g00005 - - gmx:100793499 811.986