Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4576g00004 ATGGAAGGACAGGCTTCAGTAAAAGAATTACTGCGAGTTAAGGAAGCGCCACCAGACATGTGTGATAATAAAACTCAAGAAACCTCCATTAACAGCACTATGGGTTTCAATTTTCTCAGTTTGAGCCTGAATATCTCAGAAAAAATCCACCCGAATCAAGAGCAGCCGTTTACTCAAGCAGGTTTGCTGAGAATTAAGCTAGAGGAAGCAAAGAAAGAAAATCAGAATTTAAGAGCTATGCTAAACCAGATTACTGAACACTACACTTCTCTTCAGAATCACCTTCTTTTAACTATGCAGAAGCAGCATCAGCAGCAATCATCACCGCCTCCAAAATTTCAGGATTTTCTGAATAGGGCAGATCATGTTATAGTGATGGAGAAACCAGCTTTGTCACTTGAGGGTGATCCTGGTATGAGTAGCCAAGTAAGACTGGAAGGGTCTAAAAGAATAACAGATCAAGCATTTGAGCCATCTTGCAGGAAGGCTAGAGTTTCCATACGGGCACGTTCAGATTTTTCTCTGATAGGTGATGGGTGTCAGTGGAGAAAGTATGGACAAAAGACAGCTAAGAATAACCCTTGTCCCCGAGCTTATTACCGTTGCAGCATGGGAAATGCATGCCCAGTTCGTAAACAGGTGCAAAGGTGTGTTAAGGATAATAATGTGTTCATTACAACTTATGAAGGGAGCCATAATCATCCACTCCCTGCAGCAGCCAGACCTATGGCAAGCCTAACATCAGCAGCACTGAGCATGTTACTTACGGGCTCAACCACTAGTTCTGCACATAATAACAGCACTGTCCTAAATTCAGGCCTCTTCTCTTCATTATCTGCTCCTGCCTCTAGTGGCTTGGTTTCCTTCTCTACATCATCATCATGTCCTACAATAACATTGGACTTGACTGCCCCCTCTAAAAATAACTCTTTGAACTTCCAGAGGCCTGCCTCATCACTAAACCAGTGCCAACCATTCCCTTTCTCATTGCATGGCTCAGCTCAACAAACCGAGCAACTGAATTTGTTTGCCAAGTCTCGGACCACAATGGCATCTGAGAGAAATCCTTACTTGGAGAATTTAGTTGGTGCAGCTATGGCTAAAGATCCTTCTTTCAAAGCAACATTTGTTACAGCAATATCTTCAATCACCGAAGCAACTCAGAAACTTCATAATCACAATGAACCAAGTGGGAGTGGGCATGACCATTCTTCTTAG 1218 0.4286 MEGQASVKELLRVKEAPPDMCDNKTQETSINSTMGFNFLSLSLNISEKIHPNQEQPFTQAGLLRIKLEEAKKENQNLRAMLNQITEHYTSLQNHLLLTMQKQHQQQSSPPPKFQDFLNRADHVIVMEKPALSLEGDPGMSSQVRLEGSKRITDQAFEPSCRKARVSIRARSDFSLIGDGCQWRKYGQKTAKNNPCPRAYYRCSMGNACPVRKQVQRCVKDNNVFITTYEGSHNHPLPAAARPMASLTSAALSMLLTGSTTSSAHNNSTVLNSGLFSSLSAPASSGLVSFSTSSSCPTITLDLTAPSKNNSLNFQRPASSLNQCQPFPFSLHGSAQQTEQLNLFAKSRTTMASERNPYLENLVGAAMAKDPSFKATFVTAISSITEATQKLHNHNEPSGSGHDHSS 405
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4576g00004 405 SMART WRKY_cls 176 236 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pral4576g00004 405 Coils Coil 60 87 - -
Pral4576g00004 405 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 56 390 IPR044810 GO:0003700
Pral4576g00004 405 SUPERFAMILY WRKY DNA-binding domain 170 237 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pral4576g00004 405 ProSiteProfiles WRKY domain profile. 171 237 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pral4576g00004 405 Gene3D WRKY domain 160 238 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pral4576g00004 405 Pfam WRKY DNA -binding domain 178 235 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4576g00004 Pral-Chr4576 10178 12969 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4576g00004 63 303 WRKY Transcription Factor Family AT4G04450 40.461 6.45e-61 201
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Pral4576g00004 WRKY 5.7e-23 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4576g00004 - - pcin:129300593 540.036