Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4576g00002 ATGGAAGGACAGGCTTCAGTAAAAGAATTACTGCGAGTTAAGGAAGCGCCACCAGACATGTGTGATAATAAAACTCAAGAAACCTCCATTAACAGCACTATGGGTTTCAATTTTCTCAGTTTGAGCCTGAATATCTCAGAAAAAATCCACCCGAATCAAGAGCAGCCGTTTACTCAAGCAGGTTTGCTGAGAATTAAGCTAGAGGAAGCAAAGAAAGAAAATCAGAATTTAAGAGCTATGCTAAACCAGATTACTGAACACTACACTTCTCTTCAGAATCACCTTCTTTTAACTATGCAGAAGCAGCATCAGCAGCAATCATCACCGCCTCCAAAATTTCAGGATTTTCTGAAGCAGAATAGGGCAGATCATGTTATAGTGATGGAGAAACCAGCTTTGTCACTTGAGGGTGATCCTGGTATGAGTAGCCAAGTAAGACTGGAAGGGTCTAAAAGAATAACAGATCAAGCATTTGAGCCATCTTGCAGGAAGGCTAGAGTTTCCATACGGGCACGTTCAGATTTTTCTCTGATAGGTGATGGGTGTCAGTGGAGAAAGTATGGACAAAAGACAGCTAAGAATAACCCTTGTCCCCGAGCTTATTACCGTTGCAGCATGGGAAATGCATGCCCAGTTCGTAAACAGGTGCAAAGGTGTGTTAAGGATAATAATGTGTTCATTACAACTTATGAAGGGAGCCATAATCATCCACTCCCTGCAGCAGCCAGACCTATGGCAAGCCTAACATCAGCAGCACTGAGCATGTTACTTACGGGCTCAACCACTAGTTCTGCACATAATAACAGCACTGTCCTAAATTCAGGCCTCTTCTCTTCATTATCTGCTCCTGCCTCTAGTGGCTTGGTTTCCTTCTCTACATCATCATCATGTCCTACAATAACATTGGACTTGACTGCCCCCTCTAAAAATAACTCTTTGAACTTCCAGAGGCCTGCCTCATCACTAAACCAGTGCCAACCATTCCCTTTCTCATTGCATGGCTCAGCTCAACAAACCGAGCAACTGAATTTGTTTGCCAAGTCTCGGACCACAATGGCATCTGAGAGAAATCCTTACTTGGAGAATTTAGTTGGTGCAGCTATGGCTAAAGATCCTTCTTTCAAAGCAACATTTGTTACAGCAATATCTTCAATCACCGAAGCAACTCAGAAACTTCATAATCACAATGAACCAAGTGGGAGTGGGCATGACCATTCTTCTTAG 1224 0.4289 MEGQASVKELLRVKEAPPDMCDNKTQETSINSTMGFNFLSLSLNISEKIHPNQEQPFTQAGLLRIKLEEAKKENQNLRAMLNQITEHYTSLQNHLLLTMQKQHQQQSSPPPKFQDFLKQNRADHVIVMEKPALSLEGDPGMSSQVRLEGSKRITDQAFEPSCRKARVSIRARSDFSLIGDGCQWRKYGQKTAKNNPCPRAYYRCSMGNACPVRKQVQRCVKDNNVFITTYEGSHNHPLPAAARPMASLTSAALSMLLTGSTTSSAHNNSTVLNSGLFSSLSAPASSGLVSFSTSSSCPTITLDLTAPSKNNSLNFQRPASSLNQCQPFPFSLHGSAQQTEQLNLFAKSRTTMASERNPYLENLVGAAMAKDPSFKATFVTAISSITEATQKLHNHNEPSGSGHDHSS 407
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4576g00002 407 Pfam WRKY DNA -binding domain 180 237 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pral4576g00002 407 Coils Coil 60 87 - -
Pral4576g00002 407 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 56 392 IPR044810 GO:0003700
Pral4576g00002 407 SUPERFAMILY WRKY DNA-binding domain 172 239 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pral4576g00002 407 SMART WRKY_cls 178 238 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pral4576g00002 407 ProSiteProfiles WRKY domain profile. 173 239 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pral4576g00002 407 Gene3D WRKY domain 162 240 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4576g00002 Pral-Chr4576 9839 12969 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4576g00002 150 305 WRKY Transcription Factor Family AT4G04450 59.873 1.16e-57 193
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Pral4576g00002 WRKY 5.7e-23 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4576g00002 - - pcin:129300593 548.895