Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4575g00028 ATGGAGAAACCAGCTTTGTCACTTGAGGGTGATCCTGGTATGAGTAGCCAAGTAAGACTGGAAGGGTCTAAAAGAATAACAGATCAAGCATTTGAGCCATCTTGCAGGAAGGCTAGAGTTTCCATACGGGCACGTTCAGATTTTTCTCTGATAGGTGATGGGTGTCAGTGGAGAAAGTATGGACAAAAGACAGCTAAGAATAACCCTTGTCCCCGAGCTTATTACCGTTGCAGCATGGGAAATGCATGCCCAGTTCGTAAACAGGTGCAAAGGTGTGTTAAGGATAATAATGTGTTCATTACAACTTATGAAGGGAGCCATAATCATCCACTCCCTGCAGCAGCCAGACCTATGGCAAGCCTAACATCAGCAGCACTGAGCATGTTACTTACGGGCTCAACCACTAGTTCTGCACATAATAACAGCACTGTCCTAAATTCAGGCCTCTTCTCTTCATTATCTGCTCCTGCCTCTAGTGGCTTGGTTTCCTTCTCTACATCATCATCATGTCCTACAATAACATTGGACTTGACTGCCCCCTCTAAAAATAACTCTTTGAACTTCCAGAGGCCTGCCTCATCACTAAACCAGTGCCAACCATTCCCTTTCTCATTGCATGGCTCAGCTCAACAAACCGAGCAACTGAATTTGTTTGCCAAGTCTCGGACCACAATGGCATCTGAGAGAAATCCTTACTTGGAGAATTTAGTTGGTGCAGCTATGGCTAAAGATCCTTCTTTCAAAGCAACATTGTTACAGCAATATCTTCAATCACCGAAGCAACTCAGAAACTTCATAATCACAATGAACCAAGTGGGAGTGGGCATGACCATTCTTCTTAGATGCTCTCACCGTTGCATCAGCGCTTCACCACTGGATTGA 882 0.4467 MEKPALSLEGDPGMSSQVRLEGSKRITDQAFEPSCRKARVSIRARSDFSLIGDGCQWRKYGQKTAKNNPCPRAYYRCSMGNACPVRKQVQRCVKDNNVFITTYEGSHNHPLPAAARPMASLTSAALSMLLTGSTTSSAHNNSTVLNSGLFSSLSAPASSGLVSFSTSSSCPTITLDLTAPSKNNSLNFQRPASSLNQCQPFPFSLHGSAQQTEQLNLFAKSRTTMASERNPYLENLVGAAMAKDPSFKATLLQQYLQSPKQLRNFIITMNQVGVGMTILLRCSHRCISASPLD 293
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4575g00028 293 Gene3D WRKY domain 35 113 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pral4575g00028 293 SUPERFAMILY WRKY DNA-binding domain 45 112 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pral4575g00028 293 MobiDBLite consensus disorder prediction 1 22 - -
Pral4575g00028 293 Pfam WRKY DNA -binding domain 53 110 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pral4575g00028 293 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 27 253 IPR044810 GO:0003700
Pral4575g00028 293 SMART WRKY_cls 51 111 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pral4575g00028 293 ProSiteProfiles WRKY domain profile. 46 112 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4575g00028 Pral-Chr4575 152022 153839 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4575g00028 23 178 WRKY Transcription Factor Family AT4G04450 59.873 4.11e-58 190
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Pral4575g00028 WRKY 3.4e-23 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4575g00028 - - pcin:129300593 349.747