Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4575g00015 ATGGAGGGAAAGCTTGACTCTGATGATGGGGTGAAGCCCATGACCGAGCAAGGAGCCGGAGGAGAGAAAGGCCAGGACTTGGTTCCAGAAGCTTCTCCCCTCACTGCGAATCCTGGGAAAAATGTTGACGGTGATGCTTGTAACGGAGAGGCAGTTGAAGAATCTGCTGGAGATTTACTGGGAAAGGAGCAACTCTCTGCAAACAGGTCAATGCCAGCATCTGGACCGAATGCAACTCAGCTCACCATCTTCTTTAATGGGAATGTTTGTGTCTATGATGGAATTCCTGCAGAAAAGGTGCATGAGATAATACGTATTGCTGCTTCTGCTGCTAAGTCTGCTGACATGAAGAGTGGAATGCAATCCTCCTTTACTTCACCCATTCCCTCAAGGCCATCTTCTCCACAGGGAACTCCTAATAATGTGGCTTCACCAAAACCTCTATGTTTTCCTGCGCAGAAGAGTTCCATTTGTGGGTTGCAAGAATTTCCAATTGCACGCAGACAGTCACTGCAGCGCTTTCTTGAGAAGCGACGAGATAGGTTGGGGAGCAGAGCCCCATATGCGTCTCCAGCAAGAACCAAAGCGTCTGAAAACACAGAGAACAGCTGCAGTGCTGATAATGCACCTGATCTGGCCTCCTTCAAACACTCAGAGGAGGAGCTTCAACCTAGTATCACTGCATCTTAA 690 0.4855 MEGKLDSDDGVKPMTEQGAGGEKGQDLVPEASPLTANPGKNVDGDACNGEAVEESAGDLLGKEQLSANRSMPASGPNATQLTIFFNGNVCVYDGIPAEKVHEIIRIAASAAKSADMKSGMQSSFTSPIPSRPSSPQGTPNNVASPKPLCFPAQKSSICGLQEFPIARRQSLQRFLEKRRDRLGSRAPYASPARTKASENTENSCSADNAPDLASFKHSEEELQPSITAS 229
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4575g00015 229 Pfam tify domain 76 108 IPR010399 -
Pral4575g00015 229 MobiDBLite consensus disorder prediction 115 143 - -
Pral4575g00015 229 ProSiteProfiles Tify domain profile. 74 109 IPR010399 -
Pral4575g00015 229 MobiDBLite consensus disorder prediction 111 146 - -
Pral4575g00015 229 PANTHER PROTEIN TIFY 4A-RELATED-RELATED 52 201 IPR040390 -
Pral4575g00015 229 MobiDBLite consensus disorder prediction 177 229 - -
Pral4575g00015 229 SMART tify_2 74 109 IPR010399 -
Pral4575g00015 229 MobiDBLite consensus disorder prediction 193 209 - -
Pral4575g00015 229 Pfam Jas motif 164 188 IPR018467 -
Pral4575g00015 229 MobiDBLite consensus disorder prediction 1 56 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4575g00015 Pral-Chr4575 77517 80887 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4575g00015 43 188 Tify Gene Family AT5G20900 46.711 4.33e-29 106
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Tify Pral4575g00015 tify 2.8e-15 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4575g00015 K13464 - gmx:100306045 195.282