Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4575g00014 ATGGAGGGAAAGCTTGACTCTGATGATGGGGTGAAGCCCATGACCGAGCAAGGAGCCGGAGGAGAGAAAGGCCAGGACTTGGTTCCAGAAGCTTCTCCCCTCACTGCGAATCCTGGGAAAAATGTTGACGGTGATGCTTGTAACGGAGAGGCAGTTGAAGAATCTGCTGGAGATTTACTGGGAAAGGAGCAACTCTCTGCAAACAGGTCAGCATCTGGACCGAATGCAACTCAGCTCACCATCTTCTTTAATGGGAATGTTTGTGTCTATGATGGAATTCCTGCAGAAAAGGTGCATGAGATAATACGTATTGCTGCTTCTGCTGCTAAGTCTGCTGACATGAAGAGTGGAATGCAATCCTCCTTTACTTCACCCATTCCCTCAAGGCCATCTTCTCCACAGGGAACTCCTAATAATGTGGCTTCACCAAAACCTCTATGTTTTCCTGCGCAGAAGAGTTCCATTTGTGGGTTGCAAGAATTTCCAATTGCACGCAGACAGTCACTGCAGCGCTTTCTTGAGAAGCGACGAGATAGGTTGGGGAGCAGAGCCCCATATGCGTCTCCAGCAAGAACCAAAGCGTCTGAAAACACAGAGAACAGCTGCAGTGCTGATAATGCACCTGATCTGGCCTCCTTCAAACACTCAGAGGAGGAGCTTCAACCTAGTATCACTGCATCTTAA 684 0.4854 MEGKLDSDDGVKPMTEQGAGGEKGQDLVPEASPLTANPGKNVDGDACNGEAVEESAGDLLGKEQLSANRSASGPNATQLTIFFNGNVCVYDGIPAEKVHEIIRIAASAAKSADMKSGMQSSFTSPIPSRPSSPQGTPNNVASPKPLCFPAQKSSICGLQEFPIARRQSLQRFLEKRRDRLGSRAPYASPARTKASENTENSCSADNAPDLASFKHSEEELQPSITAS 227
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4575g00014 227 MobiDBLite consensus disorder prediction 1 58 - -
Pral4575g00014 227 Pfam Jas motif 162 186 IPR018467 -
Pral4575g00014 227 Pfam tify domain 74 106 IPR010399 -
Pral4575g00014 227 MobiDBLite consensus disorder prediction 113 141 - -
Pral4575g00014 227 MobiDBLite consensus disorder prediction 174 227 - -
Pral4575g00014 227 PANTHER PROTEIN TIFY 4A-RELATED-RELATED 45 199 IPR040390 -
Pral4575g00014 227 MobiDBLite consensus disorder prediction 109 144 - -
Pral4575g00014 227 ProSiteProfiles Tify domain profile. 72 107 IPR010399 -
Pral4575g00014 227 SMART tify_2 72 107 IPR010399 -
Pral4575g00014 227 MobiDBLite consensus disorder prediction 191 207 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4575g00014 Pral-Chr4575 77514 80887 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4575g00014 43 186 Tify Gene Family AT5G20900 46.667 5.41e-28 103
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Tify Pral4575g00014 tify 2.8e-15 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4575g00014 K13464 - gmx:100306045 187.963