Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4575g00002 ATGGCGTTTCAAGACTTCGATCTCATCACCGAGAAAAGAAAAAATGACAGGAAACAGAAGCTCAAGCGCAGAATCGCCATAGGCGCAGTTTGCACCATCGTCGTCATTGGTCTTATAGGAGCAGCCGCTTTCGTAATCGTCAGCAATAACACTGAAGAAGAGAGCGAAGTCAATGACCATAACAAGAAATCCCCATCATCTTCTTCCCCAACGAGTTCACACAGTAGCTCCGGCGAGATTTCTGTGGCAGAGAAACTCGTGAAGGCCATTTGCAGTTCCACCGACTATCAGGACAAATGTGAGACAAGTCTCACCAAGGAAGTTAAAAAGGATCCGAAACTAGCACAACCAAAAGACGTCCTTAAGCTTGCCATTAGTGTCGCTCAGGACGAGGTCAATAAGGCCATAAATAAAACCAAAGACCTCAACTTTCAAACCGACAAAGAGAAAGGGGCTTACGAGGATTGCAAGAAACTTTTGGATCGCGCGAAAGACGATCTAGCGAATTCATCTTCACATGTTGGATCAGTTGACGTGAACAAGCTGACGTCCTCCTCTTCGGATTTGAACAGTTGGCTAAGTGCGGTTATCTCGTTCCAGGGAGCCTGCCTCGATGGGTTTTCTGAAGGGAAACTGAAGACAGAAATGCAGAGTGCATTTCAGGATTCAACGGAGTATGTTAGCAATACTCTTGCCATTCTATCGCAGTTAGGCTCCGTGGTTTCTTCGGCACTAAAGGAAGGTGCTAGCCGTCACTTGTTGTCGTCCGATGATCATAAAGGTCTTCCAGAGTGGATGAACGATGAAGATCGAAGGATGTTGAAGGCGGCAGATGATAAACCTACACCTAACGTCACCGTGGCCAGCGATGGCAGTGGAGACTTCAAAACCATCTCTGAAGCTCTAAAAGCTATACCACAAAAATACGATGGACGGTATGTGGTTTATGTTAAAGCAGGAACATATGATGAGACTGTACTGATAGAAGGGCGAATGGTAAACCTAACCCTTTACGGTGATGGATCGCAAAAAAGCATTATCACCGGCAACAAGAACTTCGTAGATGGAGTAAGGACCTTCCAAACTGCATCATTTGCGGTAGAAGCAGATGGATTTTTAGGAAAAGCAATGGGATTCAGAAATACAGCAGGTCCAGAGAAGCACCAGGCCGTAGCAGCAAGAGTGCAAGGAGATCGTGCGGTATTTGTGAACTGTCGTTTCGAAGGGTACCAAGACACCCTCTACGCCCTAGCCCACAGGCAATTCTACCGGAGCTGTGTGATCTCCGGCACCGTGGACTTCATCTTCGGCGATGCAGCCGCCATCTTCCAAAACTGCATAATGAACATAAGGAAACCCTTAGACAACCAGCAAAACATAGTGACAGCTCAAGGCAGAATGGACCCACGAGAAACCACTGCCATTGTTTTGCAAAGCTGCCAGATCAAGGCCGACGATTCACTTGCCTCCGTGAAAGACAAGTTCAAGAGCTACCTTGGCCGGCCATGGAAGGAGTACTCGAGAACCATTGTCATGGAATCTGAGATCGACGACGTCATCGCCCCTGAAGGGTGGATGGAATGGGAAGGAGATTTTGCACTCAAAACTTTGTTCTATGCTGAGTACAACAATACTGGAGCAGGTTCGAATACTGATAATAGAGTGAAGTGGCCCGGCTACAAGAAGATCACAAGGGAAGAGGCTAGCAACTTCACCGTGGACTCTTTCTTGGCTGGTAATTGGATCTCTGCTATCAACGTACCAGTTCAACGAGGTTTGTATAACTGA 1788 0.4704 MAFQDFDLITEKRKNDRKQKLKRRIAIGAVCTIVVIGLIGAAAFVIVSNNTEEESEVNDHNKKSPSSSSPTSSHSSSGEISVAEKLVKAICSSTDYQDKCETSLTKEVKKDPKLAQPKDVLKLAISVAQDEVNKAINKTKDLNFQTDKEKGAYEDCKKLLDRAKDDLANSSSHVGSVDVNKLTSSSSDLNSWLSAVISFQGACLDGFSEGKLKTEMQSAFQDSTEYVSNTLAILSQLGSVVSSALKEGASRHLLSSDDHKGLPEWMNDEDRRMLKAADDKPTPNVTVASDGSGDFKTISEALKAIPQKYDGRYVVYVKAGTYDETVLIEGRMVNLTLYGDGSQKSIITGNKNFVDGVRTFQTASFAVEADGFLGKAMGFRNTAGPEKHQAVAARVQGDRAVFVNCRFEGYQDTLYALAHRQFYRSCVISGTVDFIFGDAAAIFQNCIMNIRKPLDNQQNIVTAQGRMDPRETTAIVLQSCQIKADDSLASVKDKFKSYLGRPWKEYSRTIVMESEIDDVIAPEGWMEWEGDFALKTLFYAEYNNTGAGSNTDNRVKWPGYKKITREEASNFTVDSFLAGNWISAINVPVQRGLYN 595
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4575g00002 595 PANTHER PECTINESTERASE 44 583 - -
Pral4575g00002 595 MobiDBLite consensus disorder prediction 53 79 - -
Pral4575g00002 595 SMART PMEI_2 82 233 IPR006501 GO:0004857
Pral4575g00002 595 MobiDBLite consensus disorder prediction 62 79 - -
Pral4575g00002 595 Gene3D - 282 595 IPR012334 -
Pral4575g00002 595 NCBIfam pectinesterase inhibitor domain 71 237 IPR006501 GO:0004857
Pral4575g00002 595 SUPERFAMILY Pectin lyase-like 282 583 IPR011050 -
Pral4575g00002 595 FunFam Pectinesterase 278 593 - -
Pral4575g00002 595 Pfam Plant invertase/pectin methylesterase inhibitor 86 233 IPR006501 GO:0004857
Pral4575g00002 595 FunFam Pectinesterase 83 238 - -
Pral4575g00002 595 Gene3D Invertase/pectin methylesterase inhibitor family protein 82 239 IPR035513 -
Pral4575g00002 595 CDD PMEI-like_3 89 239 - -
Pral4575g00002 595 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 85 237 IPR035513 -
Pral4575g00002 595 Pfam Pectinesterase 284 580 IPR000070 GO:0030599|GO:0042545
Pral4575g00002 595 ProSitePatterns Pectinesterase signature 2. 428 437 IPR033131 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4575g00002 Pral-Chr4575 3252 5381 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4575g00002 1 595 Carbohydrate Esterase AT2G26450 48.950 0.0 609
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4575g00002 - - gmx:100784679 758.059