LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Pral4574g00016	ATGGCGTTTCAAGACTTCGATCTCATCACCGAGAAAAGAAAAAATGACAGGAAACAGAAGCTCAAGCGCAGAATCGCCATAGGCGCAGTTTGCACCATCGTCGTCATTGGTCTTATAGGAGCAGCCGCTTTCGTAATCGTCAGCAATAACACTGAAGAAGAGAGCGAAGTCAATGACCATAACAAGAAATCCCCATCATCTTCTTCCCCAACGAGTTCACACAGTAGCTCCGGCGAGATTTCTGTGGCAGAGAAACTCGTGAAGGCCATTTGCAGTTCCACCGACTATCAGGACAAATGTGAGACAAGTCTCACCAAGGAAGTTAAAAAGGATCCGAAACTAGCACAACCAAAAGACGTCCTTAAGCTTGCCATTAGTGTCGCTCAGGACGAGGTCAATAAGGCCATAAATAAAACCAAAGACCTCAACTTTCAAACCGACAAAGAGAAAGGGGCTTACGAGGATTGCAAGAAACTTTTGGATCGCGCGAAAGACGATCTAGCGAATTCATCTTCACATGTTGGATCAGTTGACGTGAACAAGCTGACGTCCTCCTCTTCGGATTTGAACAGTTGGCTAAGTGCGGTTATCTCGTTCCAGGGAGCCTGCCTCGATGGGTTTTTTGAAGGGAAACTGAAGACAGAAATGCAGAGTGCATTTCAGGATTCAACGGAGTATGTTAGCAATACTCTTGCCATTCTATCGCAGTTAGGCTCCGTGGTTTCTTCGGCACTAAAGGAAGGTGCTAGCCGTCACTTGTTGTCGTCCGATGATCATAAAGGTCTTCCAGAGTGGATGAACGATGAAGATCGAAGGATGTTGAAGGCAGCAGATGATAAACCTACACCTAACGTCACCGTGGCCAGCGATGGCAGTGGAGACTTCAAAACCATCTCTGAAGCTCTAAAAGCTATACCACAAAAATACGATGGACGGTATGTGGTTTATGTTAAAGCAGGAACATATGATGAGACTGTACTGATAGAAGGGCGAATGGTAAACCTAACCCTTTACGGTGATGGATCGCAAAAAAGCATTATCACCGGCAACAAGAACTTCGTAGATGGAGTAAGGACCTTCCAAACTGCATCATTTGCGGTAGAAGCAGATGGATTTTTAGGAAAAGCAATGGGATTCAGAAATACAGCAGGTCCAGAGAAGCACCAGGCCGTAGCAGCAAGAGTGCAAGGAGATCGTGCGGTATTTGTGAACTGTCGTTTCGAAGGGTACCAAGACACCCTCTACGCCCTAGCCCACAGGCAATTCTACCGGAGCTGTGTGATCTCCGGCACCGTGGACTTCATCTTCGGCGATGCAGCCGCCATCTTCCAAAACTGCATAATGAACATAAGGAAACCCTTAGACAACCAGCAAAACATAGTGACAGCTCAAGGCAGAATGGACCCACGAGAAACCACTGCCATTGTTTTGCAAAGCTGCCAGATCAAGGCCGACGATTCACTTGCCTCCGTGAAAGACAAGTTCAAGAGCTACCTTGGCCGGCCATGGAAGGAGTACTCGAGAACCATTGTCATGGAATCTGAGATCGACGACGTCATCGCCCCTGAAGGGTGGATGGAATGGGAAGGAGATTTTGCACTCAAAACTTTGTTCTATGCTGAGTACAACAATACTGGAGCAGGTTCGAATACTGATAATAGAGTGAAGTGGCCCGGCTACAAGAAGATCACAAGGGAAGAGGCTAGCAACTTCACCGTGGACTCTTTCTTGGCTGGTAATTGGATCTCTGCTATCAACGTACCAGTTCAACGAGGTTTGTATAACTGA	1788	0.4692	MAFQDFDLITEKRKNDRKQKLKRRIAIGAVCTIVVIGLIGAAAFVIVSNNTEEESEVNDHNKKSPSSSSPTSSHSSSGEISVAEKLVKAICSSTDYQDKCETSLTKEVKKDPKLAQPKDVLKLAISVAQDEVNKAINKTKDLNFQTDKEKGAYEDCKKLLDRAKDDLANSSSHVGSVDVNKLTSSSSDLNSWLSAVISFQGACLDGFFEGKLKTEMQSAFQDSTEYVSNTLAILSQLGSVVSSALKEGASRHLLSSDDHKGLPEWMNDEDRRMLKAADDKPTPNVTVASDGSGDFKTISEALKAIPQKYDGRYVVYVKAGTYDETVLIEGRMVNLTLYGDGSQKSIITGNKNFVDGVRTFQTASFAVEADGFLGKAMGFRNTAGPEKHQAVAARVQGDRAVFVNCRFEGYQDTLYALAHRQFYRSCVISGTVDFIFGDAAAIFQNCIMNIRKPLDNQQNIVTAQGRMDPRETTAIVLQSCQIKADDSLASVKDKFKSYLGRPWKEYSRTIVMESEIDDVIAPEGWMEWEGDFALKTLFYAEYNNTGAGSNTDNRVKWPGYKKITREEASNFTVDSFLAGNWISAINVPVQRGLYN	595

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Annotation information

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Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Pral4574g00016	595	MobiDBLite	consensus disorder prediction	53	79	-	-
	Pral4574g00016	595	Pfam	Plant invertase/pectin methylesterase inhibitor	86	233	IPR006501	GO:0004857
	Pral4574g00016	595	SUPERFAMILY	Plant invertase/pectin methylesterase inhibitor	85	237	IPR035513	-
	Pral4574g00016	595	MobiDBLite	consensus disorder prediction	62	79	-	-
	Pral4574g00016	595	Gene3D	-	282	595	IPR012334	-
	Pral4574g00016	595	Pfam	Pectinesterase	284	580	IPR000070	GO:0030599\|GO:0042545
	Pral4574g00016	595	NCBIfam	pectinesterase inhibitor domain	71	237	IPR006501	GO:0004857
	Pral4574g00016	595	SUPERFAMILY	Pectin lyase-like	282	583	IPR011050	-
	Pral4574g00016	595	FunFam	Pectinesterase	278	593	-	-
	Pral4574g00016	595	FunFam	Pectinesterase	83	238	-	-

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Pral4574g00016	Pral-Chr4574	125816	127943	Dispersed/Tandem

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Pral4574g00016	1	595	Carbohydrate Esterase	AT2G26450	48.950	0.0	608

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Pral4574g00016	-		-	gmx:100784679	756.903

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