Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral456g00004 ATGCCCTCGACAATATCGAACTTGCTGACCAACTTCACTTTCAGGCAGAGCCCGCAGTTGAAGAATAACTTCTCGAGGCTGCCTAAGTTGAATAATAACGTCATGAATTATACGAAACTGGAAGCCGCATATAATCTTACGAGGCTAGTCATGAATTACACAGGGAAGATCGAATTTCAGAGGTACGATATTACGTTTGGAACTGGATGGTCTGTGGGATATGGTGAACCATCTGGACCGTGTAAGATACACGACGCTTGCGGGACCTTTAGTAGCTGCAATGATCAGAATCTCCCTCCTTGCAAGTGTTTGCCCGGATTTCATCCCAAGTCACTGCCGGATAATTCCTCTGGAGAACGGTTTAACGGGTGTTTCGGGAAAACAGCATCGTGCGAAAGAAAAGACATTGCGTTCTTAAACTTAACGAACGTTGAAATTGGAAGCTCGGACACGCCAGTTGATGTAGAAAGCGAAGAAGAATGCCAATCTAAATGCCTCAACAAGTGCCCTCAATGCCAGGCTTATTCATATAATACTAAAATGTCGGATCGGAATCCTCCGGCTTGTTTGATCTGGACTCGGAACTTACCCACTCTCAAAGAACATTCCCCTCAAAGTGGCATTTCTCTTTCTGTCCGGTTACTGATTTCAGACATAGCATCAAATGCCAGGACCTGTGAACCTTGCGGCACAACAGTAGTTCCATATCCACTAAGCACAGGGCCAAATTGTGGAGATCCTTTGTCCTTCGAGCTAAACTGTGACAATTCAACAGGCGAGGTTAGCTTCACGATGCCTGGACTTGGACCAAATCGTGTGGCTAAAATAAATTCAGATGAACGGAAGTTGATTATCCAAATTCAAGGTCCATACATCTGTGATGATAAAGAGAACCAAAGAGTTCAGCTTGATTCACCGTTTAGTGTAACCAACTGGTGCTTTGGTCAAGATAAAATTGAGGTTAGTTGGCTTGCACCATTAGAACCTCTCTGTCATAACTCCTCAGACTGCAACGATTGGCCACATTCAACCTGCAATAGTGATTCAAAAGATGGAAAACGAAGGTGCATTTGTAATAAAAACTATTACTGGAACAACTCAACTCTAAATTGCACCACCATGTCACAAGAGTCGTCTGGAAGAAAAAAACCACTCACTCTAATTCTTGTAGTAACTATATTAACTGTGGCTTTCGTGGCATGCATGGTTGTTTTTGCCTATCTATGGAAAAGGAAAATGGCCCATAAGGAAGACAGGGGAAGAGTTCGGAGAATCCGAGGGATGTATGACAGCGAAAGAGAAGTGAAAGATTTGATAGACTTGGAAGAACTAGAAAGAGATAATGAAGGCATTGAGGTACCATATTATGATTTTGAAACTATACTGACAGCAACGGATAACTTTCCAGATGCTAACAGGCTTGGGCGGGGAGGTTATGGCCCTGTTTATAAGGGTATATTGCCAGGGGAGCACTATATTGCAGTAAAGAGGCTTTCAAATGTTTCGTCACAAGGTTTGAAGGAATTCAAGAATGAGGTTGTTTTGATATCCAAACTACAGCATCGAAACCTTGTCAGACTTCGAGGCTATTGCATTACTAAAGATGATAAAATCTTAGTTTATGAATACTTGCCAAACAAGAGCTTGGACACATTTTTGTTCTGTCAGTTTTTAGATGCATTAATTAATTTTTAA 1695 0.4189 MPSTISNLLTNFTFRQSPQLKNNFSRLPKLNNNVMNYTKLEAAYNLTRLVMNYTGKIEFQRYDITFGTGWSVGYGEPSGPCKIHDACGTFSSCNDQNLPPCKCLPGFHPKSLPDNSSGERFNGCFGKTASCERKDIAFLNLTNVEIGSSDTPVDVESEEECQSKCLNKCPQCQAYSYNTKMSDRNPPACLIWTRNLPTLKEHSPQSGISLSVRLLISDIASNARTCEPCGTTVVPYPLSTGPNCGDPLSFELNCDNSTGEVSFTMPGLGPNRVAKINSDERKLIIQIQGPYICDDKENQRVQLDSPFSVTNWCFGQDKIEVSWLAPLEPLCHNSSDCNDWPHSTCNSDSKDGKRRCICNKNYYWNNSTLNCTTMSQESSGRKKPLTLILVVTILTVAFVACMVVFAYLWKRKMAHKEDRGRVRRIRGMYDSEREVKDLIDLEELERDNEGIEVPYYDFETILTATDNFPDANRLGRGGYGPVYKGILPGEHYIAVKRLSNVSSQGLKEFKNEVVLISKLQHRNLVRLRGYCITKDDKILVYEYLPNKSLDTFLFCQFLDALINF 564
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral456g00004 564 ProSiteProfiles PAN/Apple domain profile. 131 215 IPR003609 -
Pral456g00004 564 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 16 553 - -
Pral456g00004 564 Pfam PAN domain 147 195 IPR003609 -
Pral456g00004 564 SMART ntp_6 133 214 IPR003609 -
Pral456g00004 564 SUPERFAMILY Protein kinase-like (PK-like) 453 555 IPR011009 -
Pral456g00004 564 Gene3D Phosphorylase Kinase; domain 1 431 543 - -
Pral456g00004 564 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 432 543 - -
Pral456g00004 564 Pfam S-locus glycoprotein domain 19 111 IPR000858 GO:0048544
Pral456g00004 564 Pfam Protein tyrosine and serine/threonine kinase 472 553 IPR001245 GO:0004672|GO:0006468
Pral456g00004 564 ProSiteProfiles Protein kinase domain profile. 468 564 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral456g00004 Pral-Chr456 22272 25408 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral456g00004 388 554 Receptor kinase-like Gene Family AT4G04500 44.311 7.74e-36 139
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pral456g00004 S_locus_glycop 3.6e-15 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral456g00004 - - pcin:129313312 716.072