Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral456g00003 ATGAGAAACACAAGGAGAAAGATCAGAAGGAAGATAATGCTCAACCGGTCTGCAAATCACATGCTGCCAGTATTCTTTTTGCATGCATTGTTTTTCACTTGTATGCATTGCTCTGCTAGGGATGTCATAAGCACTGACAATTTCTTAAGTGATAGGGAAGGGGACTCTCTTATTTCTGCCGGGGAAAGATTTGAACTAGGATTCTTCACCCCTAATGGAAGCTTTGGTGGTGGAAGATATGTGGGAATATGGTACTACAAGTCAAATCCACCCACAGTTGTGTGGGTTGCTAACCGAGAGAATCCACTTTCTGAAGCTGGGGGTGTTCTGGCCATAGCTGAGGATGGCAATCTCAGAGTTTTGGATGGAAGTGGGAGACATTACTGGGGTACAAATCTTGAAATGTCATCTTCAGCGCACAGGACAGCTAAGCTAATGGATAGTGGAAATCTTATTATAAGCGATGAAGAAAAAGGAAGTCACTCGGTGAAGATTGTATGGCAGAGTTTTGCAGCTCCAACAGATACATTTCTCCCCGGCATGAAAATGGATGAAAATTTGGTTCTAACTTCATGGAGAAGTTATGATGATCCGGCGCCCGGGAACTTCTCATTTCGCCAAGATCAAGGAGAGAACCAATATATCATATGGAAAAGATCTATCAGGTATTGGAAAAGCAGTACGACAGGTACATTTTTTGGGTCAGGTGAAATGTCTTCCGTAATATCTTACTTATTGTCGAATTTCACCCAGAGAATATCTCCAAATAACTCTGTTCCCTTTCTTACTTCATCTCTGTATGGCGACACAAGGCTGGTTATGACTTACTCTGGTCAGCTTCAGTATTTGAAGATGGATTCACAGAAAGTTTGGTCCTTGGTGTGGGCAGAACCACGAGATAGATGCAGCGTGTATAATGCTTGTGGTAACTTCGGCAGCTGCAATAGTAAGTATGATTTTATGTGCAAGTGTTTACCTGGGTTCACGCCTAACTCTCCCGAAGGCTGGGATTCCGGTGACTTCTCAGGTGGGTGCAGAAGGAAAACAAATGTGTGCAGAGAGAACGCTGAGAGTGACAGGTTTTTGAGTTTAAAAATGATGAAAGTAGGGAGCCCGGATGCTCAATTTAATGCCAAGAATGAAATGGAATGCAAGTTAGAATGCCTTAACAATTGCCAATGCTATGCATATTCATATCAAGATCCTAAAATCACAAGGGGGGCCGCTAGTGGTGACGCAGTGTGCTGGATTTGGACTGAAGACTTGAACAATCTTCAAGAGGAGTATGAGAATGGATGTGATCTCAATGTACGCGTAGCATATTTTGACATAGCATCCAATTGCAGGACCTGTAGGACTTGTGGTACAAACTTCATTCCATATCCACTTAGCACAGGACCACGTTGTGGCGATCCCATGTACTTAAGTTTTCACTGTAACTTCACTACAGGAGAACTTACCTTTGAAAGTCCTGGGGGCACTTATCAAGTGATAAGCATAACCCCTGAAACGCAAAAATTCATGATCCACAGCAGAGACATAAGTGATTGTGAGGGTCAAAGTTTGAGGGACAAGCTTCTGCGTCTAAACCAGTCATCTCCATTTCATCTAACTGGCAGGTGCAATGCTGACCCAAGCACCCTTAATCCAATTGCTCCTGCGAAACTTGGTGGGGAAATAGAAATGAGCTGGGATCCACCATTGGAGCCACTTTGTCGTTCTTTTTCAGACTGTAAGGACTGGCCAAATTCAATTTGCAATGCTTCCACAGATGGGCAAAAGAGATGTCTTTGCAAAACAAACTTTCTTTGGGATGGCTTGAGTTTAAATTGTACCATTGAAGGCAGCCGTCGCGGTAAAACAGGCAGGCGTTTGTCTGTTCCTTTGATTATTGCAGTCATTTTCACTATTGTGATTGTGTTAATTCTTCTTTCAAGTACCGTCACCTGTGTTTACATTTGGAGGAGAAGGATGATCAAGACAAAAGAAATCAGGAGATATGTCAAGAAAAATTCAACGAGGAGCCTGTATGACAGTGAGAGATATGTCAAAGATTTGATTGAATCGGGTAGGTTCAAAGAAGATGACGGACATGCCATAGATATCCCAAATTTTCATTTGGAAAGCATACTTGATGCTACCAATAACTTTTCAAATGCAAACAAGCTTGGACAGGGAGGATTTGGTCCTGTCTACAAGGGAAAGTTTCCAGGAGGACAAGAGATGGCAGTAAAGAGACTTTCGAGTTGCTCTGGGCAAGGTTTAGAAGAGTTCAAAAATGAAGTTGTATTGATTGCCAAGCTTCAACATCGAAACTTGGTTAGGCTTCTCGGTTATTGTGTTGAAGGAGATGAAAAGATGTTAGTGTATGAATATATGCCAAATAGGAGTCTAGATTTTTTCATATTTGATAGGAAGTCATGTGTTTTATTAGATTGGGGCAAGCGTTTCAAGATTATTTTGGGAATTGCCCGAGGGCTTCTTTACCTTCATCAAGACTCAAGGCTAAGAATCATTCATAGAGACTTGAAGACAAGCAATATTCTACTCGATAAAGAGATGAACCCTAAAATCTCAGATTTTGGTTTAGCTAGGATCTTCGGAGGAAAAGAAACAGCAACAAACACGAATAGAGTAGTTGGAACTTATGGCTATATGTCTCCAGAATATGCACTAGATGGATTTTTTTCAGTCAAGTCTGATGTGTTTAGCTTTGGCGTGGTTGTACTCGAGATTCTTAGCGGAAAAAGGAACATGGGATTTTACCAGGCAGATCATGAATTGAGTCTTTTAGGCTATGCGTGGCATTTGTGGAAAGTAGAGAGAGCACCGGATTTTATGGATCAGACACTATCTCAGACATACAAGACAGATGAATATTTGAAGTGTGTAAATGTTGGACTGTTGTGCGTACAAGAAGATCCAAGTGACCGTCCCACCATGTCCAGTGTAGTTTTCATGCTTGGAAGTGATTCCAATACCCTTCCAACTCCCAAGCAGCCAGCCTTTGTTGCTAGAAGATGCCCTTCTAGCAGAGCCTCTACTACCAGTAAAGTGGAATCTTGTTCACATAATGAATTGACTGTCACTTTAGAAAACGGTAGGTAG 3108 0.4186 MRNTRRKIRRKIMLNRSANHMLPVFFLHALFFTCMHCSARDVISTDNFLSDREGDSLISAGERFELGFFTPNGSFGGGRYVGIWYYKSNPPTVVWVANRENPLSEAGGVLAIAEDGNLRVLDGSGRHYWGTNLEMSSSAHRTAKLMDSGNLIISDEEKGSHSVKIVWQSFAAPTDTFLPGMKMDENLVLTSWRSYDDPAPGNFSFRQDQGENQYIIWKRSIRYWKSSTTGTFFGSGEMSSVISYLLSNFTQRISPNNSVPFLTSSLYGDTRLVMTYSGQLQYLKMDSQKVWSLVWAEPRDRCSVYNACGNFGSCNSKYDFMCKCLPGFTPNSPEGWDSGDFSGGCRRKTNVCRENAESDRFLSLKMMKVGSPDAQFNAKNEMECKLECLNNCQCYAYSYQDPKITRGAASGDAVCWIWTEDLNNLQEEYENGCDLNVRVAYFDIASNCRTCRTCGTNFIPYPLSTGPRCGDPMYLSFHCNFTTGELTFESPGGTYQVISITPETQKFMIHSRDISDCEGQSLRDKLLRLNQSSPFHLTGRCNADPSTLNPIAPAKLGGEIEMSWDPPLEPLCRSFSDCKDWPNSICNASTDGQKRCLCKTNFLWDGLSLNCTIEGSRRGKTGRRLSVPLIIAVIFTIVIVLILLSSTVTCVYIWRRRMIKTKEIRRYVKKNSTRSLYDSERYVKDLIESGRFKEDDGHAIDIPNFHLESILDATNNFSNANKLGQGGFGPVYKGKFPGGQEMAVKRLSSCSGQGLEEFKNEVVLIAKLQHRNLVRLLGYCVEGDEKMLVYEYMPNRSLDFFIFDRKSCVLLDWGKRFKIILGIARGLLYLHQDSRLRIIHRDLKTSNILLDKEMNPKISDFGLARIFGGKETATNTNRVVGTYGYMSPEYALDGFFSVKSDVFSFGVVVLEILSGKRNMGFYQADHELSLLGYAWHLWKVERAPDFMDQTLSQTYKTDEYLKCVNVGLLCVQEDPSDRPTMSSVVFMLGSDSNTLPTPKQPAFVARRCPSSRASTTSKVESCSHNELTVTLENGR 1035
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral456g00003 1035 Pfam Protein tyrosine and serine/threonine kinase 720 986 IPR001245 GO:0004672|GO:0006468
Pral456g00003 1035 CDD STKc_IRAK 723 988 - -
Pral456g00003 1035 Gene3D - 36 172 IPR036426 -
Pral456g00003 1035 SUPERFAMILY alpha-D-mannose-specific plant lectins 93 198 IPR036426 -
Pral456g00003 1035 Pfam D-mannose binding lectin 92 188 IPR001480 -
Pral456g00003 1035 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 27 976 - -
Pral456g00003 1035 ProSitePatterns Serine/Threonine protein kinases active-site signature. 838 850 IPR008271 GO:0004672|GO:0006468
Pral456g00003 1035 SMART serkin_6 717 987 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral456g00003 1035 Pfam S-locus glycoprotein domain 230 331 IPR000858 GO:0048544
Pral456g00003 1035 Pfam PAN-like domain 355 424 IPR003609 -
Pral456g00003 1035 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 793 996 - -
Pral456g00003 1035 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 35 170 - -
Pral456g00003 1035 CDD B_lectin 46 173 IPR001480 -
Pral456g00003 1035 SMART ntp_6 356 439 IPR003609 -
Pral456g00003 1035 Gene3D Transferase(Phosphotransferase) domain 1 793 999 - -
Pral456g00003 1035 ProSiteProfiles EGF-like domain profile. 298 334 IPR000742 -
Pral456g00003 1035 ProSiteProfiles Bulb-type lectin domain profile. 42 166 IPR001480 -
Pral456g00003 1035 ProSiteProfiles PAN/Apple domain profile. 352 433 IPR003609 -
Pral456g00003 1035 ProSiteProfiles Protein kinase domain profile. 717 1003 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral456g00003 1035 Gene3D Phosphorylase Kinase; domain 1 683 792 - -
Pral456g00003 1035 SUPERFAMILY Protein kinase-like (PK-like) 702 1016 IPR011009 -
Pral456g00003 1035 CDD PAN_AP_plant 352 440 - -
Pral456g00003 1035 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase At4g03230 682 792 - -
Pral456g00003 1035 SMART blect_4 48 173 IPR001480 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral456g00003 Pral-Chr456 7937 13381 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral456g00003 696 1003 Receptor kinase-like Gene Family AT4G23230 59.677 1.53e-123 389
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pral456g00003 PK_Tyr_Ser-Thr 4.7e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral456g00003 - - gmx:100775297 1593.56