Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4569g00004 ATGAACATCGTCTCGCTTTCTGTCTGCCAACAAGTGCCGCCCTTAGTGAATTTCCAAACGGCACTAGCCATGGAGCCTTTCTTCCGCCATCCCCCGAAAGATAAGGCGGTCGTCATACTGGGCGCTACCGGCACCGGCAAGTCCAGGCTCGCCATCGACCTCGCCACCTCCTTCCCTCCGGCGGAGATCGTCAACTCCGACAAAATGCAAGTCTACCGAGGACTCGACATCACCACCAACAAGGTCACCGAAGAAGAATGTCGCGGCGTCCAGCACCACCTCCTCGGAATCGCCGATCCTAACTCCAATTTCACAGCTGTTGACTTCACCCGCCACGCCTCCTCCGCCATTGATTCCATCGTCCGCAGAGATCGCCTTCCCATCATCGCCGGCGGCTCCAATTCCTATATTGAGGCCCTCATCGAGGACGACGCTGCGTTTCGGTTGAAGTACGAGTGCTTCTTTCTCTGGGTGGACGTCTCCCTGCCCGTCCTCGATTCATTCCTCTCGAAGCGGGTCGATCGGATGATCAAGGCGGGTCAGGTCGATGAGGTCCGTCAATTTTTCGACCCGGCAGGGGATTACACCACCGGAATCAGAAGAGCCATTGGAGTACCTGAATTTGATGAATTTCTTCGAACAGAGGCTACGGCCGACGAAGGGACCAAGAAGAGGTTACTAGAGGCTGCCATTGCCAAGATTAAAGCCAACAATTGTTCGCTGGCTCGGCGACAGATTCAGAAAATTCATCGACTTTACAACATGTGGAAGCGAAACGCGTATCGCCTCGACGCAACCGAGGTGTTCACAAAATCGGGCGACGACGCAGAGGAACTATGGGAGACTCACGTGCTAGCCAAGAGCCAGAGGATTGTACGCAAGTTCCTCCACAACGACGGTCCAATGGTTCCGCCCGCCTCAGCAATGTCGTCGGTGCCGCTGTATCCGCAGGCGAAGCAGGTGGCAATGGCCACCGCCAGTCATTAG 987 0.5583 MNIVSLSVCQQVPPLVNFQTALAMEPFFRHPPKDKAVVILGATGTGKSRLAIDLATSFPPAEIVNSDKMQVYRGLDITTNKVTEEECRGVQHHLLGIADPNSNFTAVDFTRHASSAIDSIVRRDRLPIIAGGSNSYIEALIEDDAAFRLKYECFFLWVDVSLPVLDSFLSKRVDRMIKAGQVDEVRQFFDPAGDYTTGIRRAIGVPEFDEFLRTEATADEGTKKRLLEAAIAKIKANNCSLARRQIQKIHRLYNMWKRNAYRLDATEVFTKSGDDAEELWETHVLAKSQRIVRKFLHNDGPMVPPASAMSSVPLYPQAKQVAMATASH 328
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4569g00004 328 FunFam Adenylate isopentenyltransferase 5, chloroplastic 162 260 - -
Pral4569g00004 328 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 37 147 IPR027417 -
Pral4569g00004 328 Pfam IPP transferase 150 247 - -
Pral4569g00004 328 Pfam IPP transferase 70 143 - -
Pral4569g00004 328 Gene3D - 33 296 IPR027417 -
Pral4569g00004 328 PANTHER TRNA DIMETHYLALLYLTRANSFERASE 33 296 IPR039657 -
Pral4569g00004 328 Gene3D Crystal structure of tRNA isopentenylpyrophosphate transferase (bh2366) domain 162 260 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4569g00004 Pral-Chr4569 25362 27329 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4569g00004 150 299 C2H2 Transcription Factor Family AT2G27760 31.461 6.31e-18 82.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4569g00004 K10760 - qsa:O6P43_003439 404.831