Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4567g00055 ATGCTGCCTGATCATAGAAGAAAGTCCTCTGTGGATGTAGATTTCTTCACAGAATATGGTGAAGGTAGCAGATATAGAATAGAAGAAGTAATTGGTAAAGGAAGCTATGGTGTTGTTTGCTCTGCATATGATACACACACTGGAGAAAAAGTTGCAATAAAGAAGATCAATGATATATTTGAACATGTATCTGATGCTACCCGCATTCTTCGTGAGATTAAGCTTCTTAGACTCTTGCGTCACCCAGACATTGTGGAGATCAAGCATATATTGTTACCTCCCTCTAGGAGGGAATTCAAAGATATATATGTAGTTTTTGAGCTCATGGAATCTGATCTACATCAGGTCATTAAAGCAAATGATGATTTGACTCCAGAACACTACCAATTTTTTCTCTATCAGCTTCTCCGAGGCTTGAAGTACATTCATACAGCTAATGTTTTTCATCGAGATCTAAAGCCAAAAAACATTTTAGCAAATGCTGACTGTAAACTTAAGATCTGTGACTTTGGTCTTGCCAGAGTAACTTTTAATGACACGCCAACTGCCATATTTTGGACTGATTATGTTGCAACAAGATGGTATAGGGCTCCTGAATTGTGTGGATCCTTTTTCTCCAAGTACACACCAGCCATAGATATTTGGAGTATTGGCTGTATTTTTGCAGAGCTTTTGACTGGAAAACCTCTTTTCCCGGGAAAGAATGTTGTCCATCAGCTAGACCTTATGACTGATCTTCTTGGAACACCATCCCCTGAAGCCATTGCCAGGGTGAGAAATGAGAAAGCTCGGAGATATTTGAGCAGCATGCGAAAGAAGAAGCCGGTTCCTTTGTCCCATAAGTTTCCTAATGCAGATCCCCTGGCTCTTCGTTTGTTAGAAAGAATGCTGGCATTTGAACCCAAGGATCGACCTACAGCTGAAGAGGCTTTAGCAGACCCATATTTTAAAGGTTTGGCCAAAGTTGAAAGGGAGCCTTCTGCTCAGCCGGTTAGCAAGATGGAATTTGAATTTGAGAGGCGCAGAATTACTAAGGAAGACGTAAGGGAGCTCATTTATCGAGAGATTTTGGAGTACCATCCAAAGATGCTGAAGGAATATTTAGAGGGAGCAGAGCCAATTAATTTTATGTATCCAAGTGCTGTGGACCACTTCAAGAAGCAATTTGCGTATCTTGAGGAGCACTATGGAAAAGGTGGAACAGTTGCCCCTCCCGAGAGGCAACACGCATCACTACCCAGGTTTCCTTTTAACTATTATCATTGA 1266 0.4115 MLPDHRRKSSVDVDFFTEYGEGSRYRIEEVIGKGSYGVVCSAYDTHTGEKVAIKKINDIFEHVSDATRILREIKLLRLLRHPDIVEIKHILLPPSRREFKDIYVVFELMESDLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVTFNDTPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDLMTDLLGTPSPEAIARVRNEKARRYLSSMRKKKPVPLSHKFPNADPLALRLLERMLAFEPKDRPTAEEALADPYFKGLAKVEREPSAQPVSKMEFEFERRRITKEDVRELIYREILEYHPKMLKEYLEGAEPINFMYPSAVDHFKKQFAYLEEHYGKGGTVAPPERQHASLPRFPFNYYH 421
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4567g00055 421 FunFam Mitogen-activated protein kinase 111 339 - -
Pral4567g00055 421 Gene3D Transferase(Phosphotransferase) domain 1 111 339 - -
Pral4567g00055 421 Gene3D Phosphorylase Kinase; domain 1 40 361 - -
Pral4567g00055 421 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 24 335 - -
Pral4567g00055 421 SMART serkin_6 25 316 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4567g00055 421 FunFam Mitogen-activated protein kinase 15 119 - -
Pral4567g00055 421 ProSiteProfiles Protein kinase domain profile. 25 316 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4567g00055 421 ProSitePatterns MAP kinase signature. 60 163 IPR003527 GO:0004707|GO:0005524|GO:0006468
Pral4567g00055 421 ProSitePatterns Protein kinases ATP-binding region signature. 31 55 IPR017441 GO:0005524
Pral4567g00055 421 Pfam Protein kinase domain 25 316 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4567g00055 421 SUPERFAMILY Protein kinase-like (PK-like) 22 320 IPR011009 -
Pral4567g00055 421 CDD STKc_TDY_MAPK 24 361 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4567g00055 Pral-Chr4567 192519 196669 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4567g00055 1 414 MAP Kinase Gene Family AT5G19010 93.012 0.0 805
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_MAPK Pral4567g00055 Pkinase 2.1e-68 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4567g00055 - - gmx:100814013 811.601