Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4567g00028 ATGAATGCTACGGTAAATAGAAGGGTTGTTGCTAAGCTTTTTAAGGTTCCTTCAGGTCTTCTTCCCAACGTCACAGCTTCTCCTCGAAAAATGGGTTGTGTACACGGCAAGTGTTGTAGCCGCTACCCGCCGCCGTCAGAGGGTGGTTCCGTGAACTGTCGAGAGCTCGGTCCTTCCCGTTCCCAGCGGAAACACATACTTACTCAGAAATCATTAGAGTCCATTTCCATTCCGTCCTACAACTTCAGTTTGGAATACGCCGTTCTTACGCAGAGAGGATATTACCCTGACACGCCAACTAAAGAAAACCAAGATAGTTACTGCATTAGGACACAAATTCAAGACGACCCTAATACGCATTTCTTTGGTGTCTATGATGGGCACGGCCAATTTGGTAGTCAATGTTCAAACTTTGTTAAAGATAGGTTGGTAGAGACATTATCAAATGACCACACTTTGTTGGATGACCCTGTTAAAGCATATGCTTCAGCATTTGTATCAACTAATCAAGAACTGCAGGATTCTGAGATTGATGATTCTATGAGCGGCACTACTGCAATTACAGTGCTTGTTATTGGAGACACCCTATATGTTGCTAATGTTGGTGATTCGCGAGCAGTTTTAGCTGTTAAGGATGGGAACCGCATTGTTGCTGAGGACTTGTCCTCTGATCAGACACCGTTCAGAAGAGATGAATGTGAGAGAGTGAAGCTTTGTGGGGCAAGGGTGCTGAGTGTTGATCAAGTGGAAGGGCTTAAGGATCCAAACATTCAGACTTGGGGTGATGAAGAGAGCCAGGGTTGTGATCCTCCCAGGTTATGGTTTCCAAATGCGATGTATCCTGGAACTGCATTTACAAGGAGTGTAGGGGATAGTTTAGCAGAGACCATTGGTGTCATTGCTATTCCAGAAGTGTCAATTGTTCGGCTTACACCTAATCATCCATTTTTTGTTGTTGCAAGTGATGGCGTGTTTGAGTTCCTATCGAGCCAAACCGTTGTTGATATGGTTGCAAGCTATGCGGATCCCCGTGATGCATGTGCTGCAATTGCTGGAGAATCATATAAACTATGGTTGGATCATGAAAGCCGAACAGATGATATAACAATTATCATTGTTCATATCAAAAGCCTGTCTAATTCAGTGACACGTATGGCATCAAGCGAGATCAATGTCAGTTCTTTAGCAAGGGCCAAGAAACCAACTTCCGAGATATCTCCAACCACATCTGATGTTCATCGTTCTGTGGGGAATGACTTCTCTCATTTACAGTCCTGTCAGCATGTGGTCTCCATGAGAAGTGCAGCGATAGTGGTCCCGTCTCCAGCATGCCAAAGGTCGGTTGAATTGTGA 1353 0.4464 MNATVNRRVVAKLFKVPSGLLPNVTASPRKMGCVHGKCCSRYPPPSEGGSVNCRELGPSRSQRKHILTQKSLESISIPSYNFSLEYAVLTQRGYYPDTPTKENQDSYCIRTQIQDDPNTHFFGVYDGHGQFGSQCSNFVKDRLVETLSNDHTLLDDPVKAYASAFVSTNQELQDSEIDDSMSGTTAITVLVIGDTLYVANVGDSRAVLAVKDGNRIVAEDLSSDQTPFRRDECERVKLCGARVLSVDQVEGLKDPNIQTWGDEESQGCDPPRLWFPNAMYPGTAFTRSVGDSLAETIGVIAIPEVSIVRLTPNHPFFVVASDGVFEFLSSQTVVDMVASYADPRDACAAIAGESYKLWLDHESRTDDITIIIVHIKSLSNSVTRMASSEINVSSLARAKKPTSEISPTTSDVHRSVGNDFSHLQSCQHVVSMRSAAIVVPSPACQRSVEL 450
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4567g00028 450 CDD PP2Cc 101 375 IPR001932 -
Pral4567g00028 450 SMART PP2C_4 81 373 IPR001932 -
Pral4567g00028 450 ProSitePatterns PPM-type phosphatase domain signature. 121 129 IPR000222 GO:0043169
Pral4567g00028 450 SUPERFAMILY PP2C-like 72 377 IPR036457 -
Pral4567g00028 450 PANTHER PROTEIN PHOSPHATASE 100 374 IPR015655 GO:0004722|GO:0006470
Pral4567g00028 450 FunFam Phosphatase 2C and cyclic nucleotide-binding/kinase domain-containing protein 80 377 - -
Pral4567g00028 450 Pfam Protein phosphatase 2C 114 350 IPR001932 -
Pral4567g00028 450 ProSiteProfiles PPM-type phosphatase domain profile. 85 375 IPR001932 -
Pral4567g00028 450 Gene3D - 72 377 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4567g00028 Pral-Chr4567 98152 102580 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4567g00028 31 380 PP2C-type Phosphatase Gene Family AT3G06270 70.556 0.0 524
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4567g00028 - - aprc:113872580 657.907