Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4567g00008 ATGCCTGATGACTGCAGAAGTTTAGAATATGAAGCTCCTTCTTCCCATGGTAGTACTTCCGATTCAGAGTGTCCCCCAGATGTTGCAAACAATGCCCAATGGCGCGGCCTGCTTCGTTTCATGAAAAAAGGATCTCACATGCGCTTTGCTCATCCGCCTAAAACTATTCCCAAACTCACCCGAAGAACAGTTAAACGAATCAAGGAAGACCTCATCCCTGGTCTACATTCTTCAGTTCCAACCCCATCTCTTGATCCAGATTTTTACTGCTTTAAGTCTTCGTGGATTAATTTTTCATTTGCACAGCTCAAAGCTGCCACTAACGACTTCAGTGATGATTTGTTGATCGGGAAGGGAGGTTATGCTGAGGTTTACAAAGGAAAAATGGAAGATGGGACATATGTTGCAATCAAACGGCTGACAAGAGGAAGCCAAGAAGAAATGACAGCTGATTTCTTGTCTGAACTTGGTATTATAGTACATGTTGATCATCCCAATATTGCCAGATTGATTGGTTATGGTGTGGAAGGGGGGATGTTTCTTGTTCTTCAGTTATCTCCACATGGCAGCCTCGCAGGCATACTTTATGGACCTCGAGAGAAACTGGATTGGAACATCAGATTTAAGGTTGCTCTAGGGACTGCTGAGGGCCTTCAATATCTGCATGAGGGATGTCAAAGAAGGATCATTCACAGAGATATCAAAGCTGCTAATATTCTGCTGTCAGAGGATTTTGAGCCTCAGGTATCTGATTTTGGGCTTGCAAAGTGGTTGCCTGATCAATGGACTCACCATACTGTGGACAAAATTGAAGGCACATTCGGTTACCTTCCTCCTGAATTCTTCATGCATGGAGTAGTAGATGAAAAGACCGATGTCTATGCTTATGGAGTGCTATTATTGGAGCTCATTACAGGAAGACAGGCTTTGGATAGCTCTCAGAAAAGTCTGGTGATGTGGGCAAAACCTTTGCTATCTGTAGATAAAATCAAAGAGCTCGCAGATCCATGTCTAAGTGATGCTTATGATGAAGAACAGATGAAAATTCTTGTAATAACAGCTTCCTTGTGCATAGAGCATTGTTCAGTTGAGCGACCACAAATGAGCCAGGCAAGTTCTATATGTCAAACATTTTGA 1137 0.4274 MPDDCRSLEYEAPSSHGSTSDSECPPDVANNAQWRGLLRFMKKGSHMRFAHPPKTIPKLTRRTVKRIKEDLIPGLHSSVPTPSLDPDFYCFKSSWINFSFAQLKAATNDFSDDLLIGKGGYAEVYKGKMEDGTYVAIKRLTRGSQEEMTADFLSELGIIVHVDHPNIARLIGYGVEGGMFLVLQLSPHGSLAGILYGPREKLDWNIRFKVALGTAEGLQYLHEGCQRRIIHRDIKAANILLSEDFEPQVSDFGLAKWLPDQWTHHTVDKIEGTFGYLPPEFFMHGVVDEKTDVYAYGVLLLELITGRQALDSSQKSLVMWAKPLLSVDKIKELADPCLSDAYDEEQMKILVITASLCIEHCSVERPQMSQASSICQTF 378
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4567g00008 378 Gene3D Transferase(Phosphotransferase) domain 1 187 378 - -
Pral4567g00008 378 SMART serkin_6 110 350 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4567g00008 378 PANTHER OS08G0249100 PROTEIN 15 374 IPR046958 -
Pral4567g00008 378 FunFam Receptor-like cytosolic serine/threonine-protein kinase RBK1 86 185 - -
Pral4567g00008 378 ProSitePatterns Serine/Threonine protein kinases active-site signature. 229 241 IPR008271 GO:0004672|GO:0006468
Pral4567g00008 378 ProSiteProfiles Protein kinase domain profile. 110 378 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4567g00008 378 SUPERFAMILY Protein kinase-like (PK-like) 90 371 IPR011009 -
Pral4567g00008 378 Gene3D Phosphorylase Kinase; domain 1 83 184 - -
Pral4567g00008 378 Pfam Protein tyrosine and serine/threonine kinase 116 319 IPR001245 GO:0004672|GO:0006468
Pral4567g00008 378 FunFam receptor-like cytosolic serine/threonine-protein kinase RBK2 187 377 - -
Pral4567g00008 378 MobiDBLite consensus disorder prediction 1 27 - -
Pral4567g00008 378 MobiDBLite consensus disorder prediction 12 27 - -
Pral4567g00008 378 ProSitePatterns Protein kinases ATP-binding region signature. 116 138 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4567g00008 Pral-Chr4567 33170 35750 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4567g00008 84 376 Receptor kinase-like Gene Family AT1G53420 39.867 9.73e-69 231
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VI Pral4567g00008 PK_Tyr_Ser-Thr 5.1e-40 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4567g00008 - - gmx:102670300 572.392