Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4566g00001 ATGGACTGCAATAAAGAAGAGGCCTTACGGGCCAAGGTAATTGCTGAAAAGAAGATGGAAAGTAAAGATTTCATTGGGGCTCGTAAAATTGCTCTTAAAGCTCAGCAACTATATCCTGATCTGGAGAACATAACTCAAATGCTTATTATATGTGATGTGCATTGCTCTGCGGAGCAGAAATTGTTTGGGAATGAGATGGACTGGTATGGAATTCTTCAAGTTGGGCGGTCAGCTGATGAGGCAATGATAAAGAAACAATACAGGAAGTTTGCCCTCCAACTTCATCCTGACAAGAACAAGTTTTCCGGTGCAGAAGCTGCATTTAAACTAATTGGGGAAGCCCAAAGGGTACTTTTGGACAAAAATAAACGGGCTATACTTGACATGAAGTACAAAGTTCCTATGAACAGAACTACAAAGCCATATCATCCACCACAGAAGTTTCATACAAATGTGAGTGCTGGGGTGCAAAACAATGTCAGGGCGAATTTTCCCAACATGAATCCTCAGAAGCAGCAACAGCCTAGGCAGTCTACACAGCAGGGACCCAATGGTAGCCGCCCTACATTTTGGACTGCTTGCCCATTTTGTAATAGTAGATATGAGTTTCACTTTGAAGCTGTGAATAGATCTGTTTCCTGTCACACTTGTCATAGGCCCTTTATTGCATATCTGCTTGGTACATCAGTAGCAGCTAATTCAAGTCGTCAAGCTTTTGGGCAACAAAAAGATGGTTTAAATCATGGTGCTGATGTTGGGTCCCAGGGTATGAATACTGGGAACGTCAATACAAAGCCTTCTGTGAAAAAAGGCCCGAACATCCCTGATAAACCAAATAGAAAGAGAAAGAGGAAGAGGGTAGCAGACTTTAGCGAAAGTGCTGATTCCGCAGACAGCAATGATTCTGAAGATGATATGGCTGTTGACAAGGATGGTGCTCGTGGTGAACAAGGAGGCCGAGAACAGCATCGACGTAGATCTACAAGGTCTAAGCCTCAGGTTGTATATAATGAGAATGGAAGTGATGATGATGATGACCTAAATCCCTCAATGGGGGCCAAGGGAAGTGGCTCATGTGGTGCGGAAGAAGACAATGGGGAGACAGCTAAAATGAATAACCGTAATGGCTCAGCTGCTGACCTGAAAGATGATCAGAAAGAGGTGAAACAAGAGAGCTTACACAAGAGAAATGAGGAAACTCTGGACAAGAGGGGAAAAGAGGCAAACCAGTGCTCAAATGGGACAGGGGAAGCAGCAGAAGATCCAACCTTTTTTGTCTATCCTGATGCAGAGTTCAGTGACTTTGAAAAGGACAAGAAAGAAGGTAGTTTTGCGAATGGACAGATTTGGGCTATATATGACACAATTGATGGCATGCCGAGATTCTATGCTTTGATCAGGAAAGTCCTCTCTCCCGGATTCAAGCTGCGAATAACATGGTTTGAAGCAGAGCCAGATGATGAAAATGAAATCAACTGGGTAGAAAATAACCTGCCAGTTGCTTGTGGGAAGTATGTGCTTGGCAACACTGAAATTACTGAAGATCGTCTTATGTTCTCACATCTGATTTTGTGTGAAAAGATTGGCCGTAGTACTTTTAAAGTTTATCCTAGGAAGGGTGAGATTTGGGCTCTGTTTAAAAATTGGGATATCAAATGGTACACTGATGTGGAATCTCATCAAAAGTATGAATTTGACTTTGTTGAAGTTTTGTCGGATTACGTTGAAGGAGGGGAGGTATCTGTTGCATACTTGGAGAAGATGAAAGGTTTTGTGAGCCTCTTCACTCGAGCTAACAAGAACGGTGAAGATTCATTTCAAATTCCATCGGTGGAGTTATTTAGATTCTCTCATAGGATTCCTTCATTTAAAATGACTGGTCAGGAAAGAGTAGGTGTCCCTAAAGGATCTTTTGAACTTGATCCTGCATCTTTGCCGGAAAATCTTGAATAG 1953 0.4235 MDCNKEEALRAKVIAEKKMESKDFIGARKIALKAQQLYPDLENITQMLIICDVHCSAEQKLFGNEMDWYGILQVGRSADEAMIKKQYRKFALQLHPDKNKFSGAEAAFKLIGEAQRVLLDKNKRAILDMKYKVPMNRTTKPYHPPQKFHTNVSAGVQNNVRANFPNMNPQKQQQPRQSTQQGPNGSRPTFWTACPFCNSRYEFHFEAVNRSVSCHTCHRPFIAYLLGTSVAANSSRQAFGQQKDGLNHGADVGSQGMNTGNVNTKPSVKKGPNIPDKPNRKRKRKRVADFSESADSADSNDSEDDMAVDKDGARGEQGGREQHRRRSTRSKPQVVYNENGSDDDDDLNPSMGAKGSGSCGAEEDNGETAKMNNRNGSAADLKDDQKEVKQESLHKRNEETLDKRGKEANQCSNGTGEAAEDPTFFVYPDAEFSDFEKDKKEGSFANGQIWAIYDTIDGMPRFYALIRKVLSPGFKLRITWFEAEPDDENEINWVENNLPVACGKYVLGNTEITEDRLMFSHLILCEKIGRSTFKVYPRKGEIWALFKNWDIKWYTDVESHQKYEFDFVEVLSDYVEGGEVSVAYLEKMKGFVSLFTRANKNGEDSFQIPSVELFRFSHRIPSFKMTGQERVGVPKGSFELDPASLPENLE 650
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4566g00001 650 Gene3D DnaJ domain 64 186 IPR036869 -
Pral4566g00001 650 Pfam DnaJ domain 67 128 IPR001623 -
Pral4566g00001 650 ProSiteProfiles dnaJ domain profile. 67 131 IPR001623 -
Pral4566g00001 650 PANTHER DNAJ HEAT SHOCK AMINO-TERMINAL DOMAIN PROTEIN-RELATED 1 650 - -
Pral4566g00001 650 MobiDBLite consensus disorder prediction 377 406 - -
Pral4566g00001 650 MobiDBLite consensus disorder prediction 252 268 - -
Pral4566g00001 650 MobiDBLite consensus disorder prediction 306 323 - -
Pral4566g00001 650 CDD DnaJ 67 120 IPR001623 -
Pral4566g00001 650 Pfam Domain of unknown function (DUF3444) 424 629 IPR024593 -
Pral4566g00001 650 SMART dnaj_3 66 123 IPR001623 -
Pral4566g00001 650 SUPERFAMILY Chaperone J-domain 63 135 IPR036869 -
Pral4566g00001 650 MobiDBLite consensus disorder prediction 160 186 - -
Pral4566g00001 650 MobiDBLite consensus disorder prediction 239 420 - -
Pral4566g00001 650 PRINTS DnaJ domain signature 69 87 IPR001623 -
Pral4566g00001 650 PRINTS DnaJ domain signature 103 123 IPR001623 -
Pral4566g00001 650 PRINTS DnaJ domain signature 87 102 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4566g00001 Pral-Chr4566 4521 8110 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4566g00001 4 223 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT2G01710 32.889 6.43e-27 110
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4566g00001 - - pcin:129310047 1092.41