Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4565g00050 ATGAATCAGTACCACATCTACGAAGCCATCGGTCGCGGCAAATACTCGACCGTGTATAAAGGCAGGAAGAAGAAGACCATCGAGTATTTTGCGATTAAGAGTGTTGATAAGTCGCAGAAAAGCAAGGTTCTTCAAGAAGTCAGGATTCTTCACTCTTTAGATCATGAAAATGTACTCAAATTTTATTCTTGGTATGAAACTTCTGCTCACCTGTGGTTGGTCCTGGAGTATTGCGTTGGAGGAGATTTGCTTGCCTTATTACAGCAGGATAATCATCTACCTGAAGATTCTATTTACGATCTTGCTCATGACCTAGTCAAAGCTTTGCAGTACTTGCATTCAAATGGAATAATATATTGTGACTTGAAACCATCAAATATTCTGCTGGATGAAAATGGATGTGCAAAGCTTTGTGATTTTGGCTTGGCTAGAAAATTGAAAGATATATCAAAAATTCCTTCATCATCGTTGCCGCAAGCAAAACGTGGAACACCCTCCTATATGGCTCCCGAACTTTTTGAGGATGGTGGAGTCCATTCATATGCTTCTGATTTTTGGGCCCTGGGTTGTGTCCTCTACGAATGTTACACTGGCAGACCACCCTTTGTAGGAAGAGAATTCACTAAACTTGTAAAATCCATCATTTCAGATCCAACTCCACCTCTTCCTGGTAATCCAAGTCGCTCTTTTGTCAATTTGATTAATTCTCTATTGGTGAAAGATCCAGCTGAAAGAATACAATGGCCTGAGCTTTGCGGGCATGCATTTTGGAAAACCAAAGTGAATTTGGTGTCTTTACCGCCGCAACCTGCTTTTGATGATATGATAGAGCTGCATGCTAAACCATGTTTATCAGAACGCAATGGTGACAAATCCTCCCAAAACAGAACTCCTCCCAAATGCCGAGAAAAAGATATGAGAGGGTTGTTCAAGCAAGATGAGAATTCCATCATGGGACCGAGAGGTCACGATACACCTACTAGGGGTCCACCAAATGGCCATAAAACTCAAATAAAGGGTTTTGGCAAAACAACTGAGTTGAGGCAGAAAGATGCTTCCAATGCTAACAAGGCTATGAACCTTTTGAGACTCTCAAGAATAGCAAAATCGAATTTACAGAAGGAAAATGAGAAAGAGAATTATCGACGCCCCTTGCCTAATAGCTCTGATAATGACTCTGAAGTTAAAATTGAGAATACTGATATGGAACTTGATTTTGATGAAAATACAGAAGATGATGCACATGATGAAATTGATGGTTCTGATCATACAACTTCTGTGCCTGATGAGAAGATGTCCAATCAAAACCAAAAACAGGGGAAACCAGAGGAGATAGAAAGTAATATACATCAGCAAGACACCCCTTCTATTGTTAACACACCCAACTCAGACGATTCAAGGTCAATTGATCCGGAATCAACTCCTGAGCATCCTGACATGTCTTCTATCTCTCCCAGTGTGAGCCCTCAGGTCAGGAAGCATAGGGTTAAAGAAGACTTGGGATCTGCTTTTGATTCTGATTCTTCAAGGTCTTCCGGTAACATTTCCCAGGTTCTTTGGCATCAATCTGATCTCTCAGTCAGGCCTGTCATGCCCAGTAGAAAAATTGATAAAGAGGTCATCCCTTCACTTCCTTTTGAGGCTTTTGCTGTGTCTGATTTTGTAAAGATGTCAAAAGAACAATTGGATATTATCCAAAACCGAATTGTAGCAATTTTCAATGGGAACTCCATCATTGGGGAGAAACAGAATGTCATTAGATACCTTGAGATGTTGAGCAATAATGCTGATGCAGCTAATATCTTGACAAATGGGCCAATAATGCTCACACTTGTAAAATTGCTTCGTCAGTCCAAGGCATCCGCTTTACGTGTTCAACTTGCTTCGCTGATTGGTTTGTTGATACGGCACTCTACTTATATTGATGACAGTTTGGCTAATTGTGGAATTTTAAGTTCACTGACTGATGGCCTTAGAGACAAGCAGGACAAAGTGAGGAGGTTTTCGATGGCTGCTTTAGGTGAGCTACTATTCTACATATCAACTCAAAATGAGGACAATAGAGATAACAGTCAGCTCGAATCTCCGTTGAAGGACAATCGGACTACATGTGGCTGGCAGGTTCCAATTCGATATCTTTGTTTCATCGCTTTTGCGGAAGGGAGAGGATGA 2172 0.4098 MNQYHIYEAIGRGKYSTVYKGRKKKTIEYFAIKSVDKSQKSKVLQEVRILHSLDHENVLKFYSWYETSAHLWLVLEYCVGGDLLALLQQDNHLPEDSIYDLAHDLVKALQYLHSNGIIYCDLKPSNILLDENGCAKLCDFGLARKLKDISKIPSSSLPQAKRGTPSYMAPELFEDGGVHSYASDFWALGCVLYECYTGRPPFVGREFTKLVKSIISDPTPPLPGNPSRSFVNLINSLLVKDPAERIQWPELCGHAFWKTKVNLVSLPPQPAFDDMIELHAKPCLSERNGDKSSQNRTPPKCREKDMRGLFKQDENSIMGPRGHDTPTRGPPNGHKTQIKGFGKTTELRQKDASNANKAMNLLRLSRIAKSNLQKENEKENYRRPLPNSSDNDSEVKIENTDMELDFDENTEDDAHDEIDGSDHTTSVPDEKMSNQNQKQGKPEEIESNIHQQDTPSIVNTPNSDDSRSIDPESTPEHPDMSSISPSVSPQVRKHRVKEDLGSAFDSDSSRSSGNISQVLWHQSDLSVRPVMPSRKIDKEVIPSLPFEAFAVSDFVKMSKEQLDIIQNRIVAIFNGNSIIGEKQNVIRYLEMLSNNADAANILTNGPIMLTLVKLLRQSKASALRVQLASLIGLLIRHSTYIDDSLANCGILSSLTDGLRDKQDKVRRFSMAALGELLFYISTQNEDNRDNSQLESPLKDNRTTCGWQVPIRYLCFIAFAEGRG 723
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4565g00050 723 MobiDBLite consensus disorder prediction 475 489 - -
Pral4565g00050 723 MobiDBLite consensus disorder prediction 449 468 - -
Pral4565g00050 723 Gene3D Transferase(Phosphotransferase) domain 1 1 306 - -
Pral4565g00050 723 MobiDBLite consensus disorder prediction 411 496 - -
Pral4565g00050 723 FunFam Maternal embryonic leucine zipper kinase 1 286 - -
Pral4565g00050 723 SUPERFAMILY Protein kinase-like (PK-like) 1 258 IPR011009 -
Pral4565g00050 723 Gene3D - 555 692 IPR011989 -
Pral4565g00050 723 Pfam Protein kinase domain 4 256 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4565g00050 723 CDD STKc_ULK4 3 257 - -
Pral4565g00050 723 MobiDBLite consensus disorder prediction 296 311 - -
Pral4565g00050 723 MobiDBLite consensus disorder prediction 370 385 - -
Pral4565g00050 723 MobiDBLite consensus disorder prediction 427 442 - -
Pral4565g00050 723 MobiDBLite consensus disorder prediction 370 397 - -
Pral4565g00050 723 SMART serkin_6 4 257 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4565g00050 723 MobiDBLite consensus disorder prediction 283 344 - -
Pral4565g00050 723 ProSitePatterns Protein kinases ATP-binding region signature. 10 33 IPR017441 GO:0005524
Pral4565g00050 723 ProSitePatterns Serine/Threonine protein kinases active-site signature. 117 129 IPR008271 GO:0004672|GO:0006468
Pral4565g00050 723 FunFam Aurora kinase A 1 81 - -
Pral4565g00050 723 PANTHER SERINE/THREONINE-KINASE ULK4-LIKE PROTEIN-RELATED 1 710 IPR044591 GO:0000911|GO:0000914|GO:0008017
Pral4565g00050 723 SUPERFAMILY ARM repeat 569 683 IPR016024 -
Pral4565g00050 723 ProSiteProfiles Protein kinase domain profile. 4 257 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4565g00050 Pral-Chr4565 222842 230784 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4565g00050 1 258 AGC Kinase Gene Family AT1G45160 34.364 1.25e-39 155
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK ULK_ULK4 Pral4565g00050 Pkinase 2.6e-67 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4565g00050 K17545 - gmx:100777288 1169.84