Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4565g00046 ATGGCTGTCGAAGCATTGATCACGAAATTAACGACAATGATGACATCTGATCATGCTTCAGTGGTCTCAATGAACCTATTCGTGGCACTTCTTTGTGCTTGCATCGTAATCGGTCATTTGCTGGAGGAGAACCGATGGATTAACGAATCCATCACTGCTCTCGTTATTGGTCTCTGCACTGGGATTTTTATCCTGCTTACGACTGGAGGAAAAAGCTCCCATATATTAGTTTTCAGTGAAGATCTTTTCTTTATTTACCTTCTGCCGCCTATCATTTTCAATGCCGGGTTTCAGGTGAAGAAGAAGCAATTTTTTCGCAATTTTATGACAATCATGCTTTTTGGTGCAGTTGGCACTTTAATATCTTTTGGCATCATATCGCTAGGGGCTATACACTTTTTCCCAAAATTGGATATTGGATCCCTGAAGCTCGGAGATTATCTGGCAATTGGAGCAATATTTTCAGCAACAGATTCTGTTTGCACACTGCAGGTGCTTAATCAGGACGAGACACCTTTATTGTACAGCCTGGTTTTTGGGGAAGGGGTCGTAAATGATGCGACATCTGTAGTGCTCTTGAAAGCAATCCAGAACTTTGACCTTTCTCACATCGACTTGATTACTGGTTTCCACTTAATTGGAAATTTTTTCTACTTATTTACAGCAAGCACTGTGCTGGGAGTCTTGGCTGGATTGCTTAGCGCATTCATCATAAAAAAGCTTTATTTTGGCAGGCATTCTACGGACCGTGAGGTTGCCCTCATGATACTCATGGCCTACCTTTCATATATGCTAGCGGAACTATTCAATTTAAGTGCCATTCTGACAGTGTTCTTCTGCGGCATTGTCATGTCTCACTACACGTGGCATAATGTGACTGAAAGTTCAAGAGTTACAACTAAACATGCTTTTGCGACTTTGTCTCTCATTGCCGAGATCTTTATCTTCCTCTACGTTGGGATGGATGCACTGGATATAGAGAAGTGGAGGTTTGCCCGTCAAAGCCCTGGAAAATCAATCGGGATCAGTTCATTGCTATTGGCACTCATCCTAGTGGGAAGAGCAGCATTTGTTTTCCCTCTGTCGTTCTTAGCCAACTTGCCTAAGAAGTCGCAATCTGGGAAAATCGAGATAAAGCAACAAGTGACGATCTGGTGGGCCGGTCTCATGCGTGGAGCAGTTTCTATGGCACTTGCCTATAATCAGTTCACCCGGTCAGGCTATACTAAATTGCGTGAGAATGCCATCATGATCACCAGTACCATCATAGTTATACTATTCAGCACTGTGGTGTTTGGGTTGATGACCAAGCCACTTGTGAGGCTACTGCTTCCTATTTCAAAACATAAGAGTATCATACCGTCCCCACCGGGTACTCCCAAATCGTTCGTGGTGCCACTTCTCGAGAATGGCCAGGAATCAGAGGGTAATGGTGGCACACACAATGGCCATCGCCCTAGCAGATTGCGCTTGCTACTGAGCTTACCTACTAGGGGCGTCCACCATTATTGGCGAAAGTTTGATGATGCTGTCATGCGACCTGTTTTCGGTGGGCGGGGTTTTGTGCCCTTTGTTCCTGGCTCACCCCTTGAGCAGAGTGTTCACCAATGGCAATAA 1617 0.4465 MAVEALITKLTTMMTSDHASVVSMNLFVALLCACIVIGHLLEENRWINESITALVIGLCTGIFILLTTGGKSSHILVFSEDLFFIYLLPPIIFNAGFQVKKKQFFRNFMTIMLFGAVGTLISFGIISLGAIHFFPKLDIGSLKLGDYLAIGAIFSATDSVCTLQVLNQDETPLLYSLVFGEGVVNDATSVVLLKAIQNFDLSHIDLITGFHLIGNFFYLFTASTVLGVLAGLLSAFIIKKLYFGRHSTDREVALMILMAYLSYMLAELFNLSAILTVFFCGIVMSHYTWHNVTESSRVTTKHAFATLSLIAEIFIFLYVGMDALDIEKWRFARQSPGKSIGISSLLLALILVGRAAFVFPLSFLANLPKKSQSGKIEIKQQVTIWWAGLMRGAVSMALAYNQFTRSGYTKLRENAIMITSTIIVILFSTVVFGLMTKPLVRLLLPISKHKSIIPSPPGTPKSFVVPLLENGQESEGNGGTHNGHRPSRLRLLLSLPTRGVHHYWRKFDDAVMRPVFGGRGFVPFVPGSPLEQSVHQWQ 538
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4565g00046 538 PRINTS Na+/H+ exchanger signature 82 93 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016020|GO:0055085
Pral4565g00046 538 PRINTS Na+/H+ exchanger signature 111 119 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016020|GO:0055085
Pral4565g00046 538 PRINTS Na+/H+ exchanger signature 151 161 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016020|GO:0055085
Pral4565g00046 538 PRINTS Na+/H+ exchanger signature 96 110 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016020|GO:0055085
Pral4565g00046 538 Pfam Sodium/hydrogen exchanger family 27 441 IPR006153 GO:0006812|GO:0015297|GO:0016020|GO:0055085|GO:1902600
Pral4565g00046 538 Gene3D - 143 194 - -
Pral4565g00046 538 PANTHER SODIUM/HYDROGEN EXCHANGER 15 516 IPR018422 GO:0006812|GO:0015385|GO:0016020|GO:1902600
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4565g00046 Pral-Chr4565 205695 210089 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4565g00046 5 536 Antiporters AT3G05030 74.302 0.0 809
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4565g00046 - - ccaj:109808409 895.96