Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4565g00026 ATGACTGACAACTTTGGATCGAAGGCATTGATTGGTGAAGGATCTTATGGGAGAGTATATTATGCAACTTTAAATAATGGAAAGGCTGTTGCTGTGAAGAAGCTTGATGTTTCTTCGGAACCTGAATCCAATGTTGAGTTTTTGACCCAGGTTTCTACCGTCTCAAGAATGAAGCACGAAAATTTTGTTGAGCTGCATGGTTATTGTGTTGAAGGAAATCTTCGTATACTCGCATATGAGTTTGCAACCATGGGCTCTCTTCATGACATATTGCATGGTAGGAAGGGAGTTCAAGGGGCACAGCCAGGACCAACCCTTGACTGGATGCAACGAGTTCGAATTGCAGTTGATGCAGCAAGGGGGTTGGAATATCTACATGAGAAAGTTCAGCCGCCTATCATACACAGAGATATCCGATCAAGCAATGTACTAATTTTTGATGATTACAAAGCAAAGATAGCTGATTTTAATCTTTCAAATCAGGCCCCTGACATGGCTGCGCGTCTTCATTCCACTCGAGTTTTGGGAACTTTTGGCTATCATGCTCCAGAGTATGCAATGACTGGTCAGTTGACTCAAAAAAGTGATGTCTACAGTTTTGGTGTTGTTCTTCTTGAGCTCCTTACAGGGAGAAAACCTGTTGACCATACCATGCCTCGAGGACAGCAGAGTCTGGTTACATGGGCTACTCCGAGATTGAGTGAAGATAAAGTCAAACAATGCGTGGATCCAAAACTGAAGGGAGAATATCCTCCCAAAGGAGTCGCAAAGCTGGCGGCTGTTGCAGCACTTTGTGTGCAGTACGAAGCCGAGTTTAGGCCAAACATGAGCATCGTGGTCAAGGCGCTGCAACCACTTCTGAAGGCTCCTCCTGCTCAAGCACCGGAAACTTGA 894 0.4485 MTDNFGSKALIGEGSYGRVYYATLNNGKAVAVKKLDVSSEPESNVEFLTQVSTVSRMKHENFVELHGYCVEGNLRILAYEFATMGSLHDILHGRKGVQGAQPGPTLDWMQRVRIAVDAARGLEYLHEKVQPPIIHRDIRSSNVLIFDDYKAKIADFNLSNQAPDMAARLHSTRVLGTFGYHAPEYAMTGQLTQKSDVYSFGVVLLELLTGRKPVDHTMPRGQQSLVTWATPRLSEDKVKQCVDPKLKGEYPPKGVAKLAAVAALCVQYEAEFRPNMSIVVKALQPLLKAPPAQAPET 297
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4565g00026 297 Gene3D Phosphorylase Kinase; domain 1 1 81 - -
Pral4565g00026 297 Pfam Protein tyrosine and serine/threonine kinase 10 283 IPR001245 GO:0004672|GO:0006468
Pral4565g00026 297 SUPERFAMILY Protein kinase-like (PK-like) 2 283 IPR011009 -
Pral4565g00026 297 ProSitePatterns Protein kinases ATP-binding region signature. 11 34 IPR017441 GO:0005524
Pral4565g00026 297 PIRSF ILK 1 294 - -
Pral4565g00026 297 Gene3D Transferase(Phosphotransferase) domain 1 83 294 - -
Pral4565g00026 297 PANTHER PTO-INTERACTING PROTEIN 1-LIKE 1 291 - -
Pral4565g00026 297 SMART tyrkin_6 5 283 IPR020635 GO:0004713|GO:0006468
Pral4565g00026 297 ProSiteProfiles Protein kinase domain profile. 5 287 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4565g00026 297 FunFam PTI1-like tyrosine-protein kinase 3 83 292 - -
Pral4565g00026 297 ProSitePatterns Tyrosine protein kinases specific active-site signature. 133 145 IPR008266 GO:0004672|GO:0006468
Pral4565g00026 297 CDD STKc_IRAK 11 286 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4565g00026 Pral-Chr4565 122307 124928 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4565g00026 2 288 Receptor kinase-like Gene Family AT3G58690 48.611 3.72e-90 272
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIII Pral4565g00026 PK_Tyr_Ser-Thr 2.6e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4565g00026 K13436 - gmx:100790016 541.576