Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4565g00025 ATGGACGAAAGAGACTTCCGTCGTCGTAATCCGATGGCACATGCTTCTCCTCCTAATTACTTTGTTCGCCTGGAGAATACAGCTTCCAAAGACGATTTATATTTGAGAAAGAGGACCGGGATGCGTCGGTGGCTTTGTTGTTCTTGTCATGTTGAAGAGCCTTACCCTTCTGAAAACGAGCACCTTAAAAGCCCAAGGAATTATGGAGATGGTAACCCAAAAGGTTCAAAGGCTTCAGCTCCTGTTAAAGCTGAAACACAAAAGGCTGCACCACCTATTGAAGTGCCAGCATTAGCTTTAGATGAACTGAAAGAAATGACTGACAACTTTGGATCGAAGGCATTGATTGGTGAAGGATCTTATGGGAGAGTATATTATGCAACTTTAAATAATGGAAAGGCTGTTGCTGTGAAGAAGCTTGATGTTTCTTCGGAACCTGAATCCAATGTTGAGTTTTTGACCCAGGTTTCTACCGTCTCAAGAATGAAGCACGAAAATTTTGTTGAGCTGCATGGTTATTGTGTTGAAGGAAATCTTCGTATACTCGCATATGAGTTTGCAACCATGGGCTCTCTTCATGACATATTGCATGGTAGGAAGGGAGTTCAAGGGGCACAGCCAGGACCAACCCTTGACTGGATGCAACGAGTTCGAATTGCAGTTGATGCAGCAAGGGGGTTGGAATATCTACATGAGAAAGTTCAGCCGCCTATCATACACAGAGATATCCGATCAAGCAATGTACTAATTTTTGATGATTACAAAGCAAAGATAGCTGATTTTAATCTTTCAAATCAGGCCCCTGACATGGCTGCGCGTCTTCATTCCACTCGAGTTTTGGGAACTTTTGGCTATCATGCTCCAGAGTATGCAATGACTGGTCAGTTGACTCAAAAAAGTGATGTCTACAGTTTTGGTGTTGTTCTTCTTGAGCTCCTTACAGGGAGAAAACCTGTTGACCATACCATGCCTCGAGGACAGCAGAGTCTGGTTACATGGGCTACTCCGAGATTGAGTGAAGATAAAGTCAAACAATGCGTGGATCCAAAACTGAAGGGAGAATATCCTCCCAAAGGAGTCGCAAAGCTGGCGGCTGTTGCAGCACTTTGTGTGCAGTACGAAGCCGAGTTTAGGCCAAACATGAGCATCGTGGTCAAGGCGCTGCAACCACTTCTGAAGGCTCCTCCTGCTCAAGCACCGGAAACTTGA 1209 0.4475 MDERDFRRRNPMAHASPPNYFVRLENTASKDDLYLRKRTGMRRWLCCSCHVEEPYPSENEHLKSPRNYGDGNPKGSKASAPVKAETQKAAPPIEVPALALDELKEMTDNFGSKALIGEGSYGRVYYATLNNGKAVAVKKLDVSSEPESNVEFLTQVSTVSRMKHENFVELHGYCVEGNLRILAYEFATMGSLHDILHGRKGVQGAQPGPTLDWMQRVRIAVDAARGLEYLHEKVQPPIIHRDIRSSNVLIFDDYKAKIADFNLSNQAPDMAARLHSTRVLGTFGYHAPEYAMTGQLTQKSDVYSFGVVLLELLTGRKPVDHTMPRGQQSLVTWATPRLSEDKVKQCVDPKLKGEYPPKGVAKLAAVAALCVQYEAEFRPNMSIVVKALQPLLKAPPAQAPET 402
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4565g00025 402 SMART tyrkin_6 110 388 IPR020635 GO:0004713|GO:0006468
Pral4565g00025 402 ProSitePatterns Protein kinases ATP-binding region signature. 116 139 IPR017441 GO:0005524
Pral4565g00025 402 PANTHER PTO-INTERACTING PROTEIN 1-LIKE 44 396 - -
Pral4565g00025 402 ProSitePatterns Tyrosine protein kinases specific active-site signature. 238 250 IPR008266 GO:0004672|GO:0006468
Pral4565g00025 402 Pfam Protein tyrosine and serine/threonine kinase 115 388 IPR001245 GO:0004672|GO:0006468
Pral4565g00025 402 ProSiteProfiles Protein kinase domain profile. 110 392 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4565g00025 402 MobiDBLite consensus disorder prediction 56 88 - -
Pral4565g00025 402 SUPERFAMILY Protein kinase-like (PK-like) 92 388 IPR011009 -
Pral4565g00025 402 Gene3D Transferase(Phosphotransferase) domain 1 188 399 - -
Pral4565g00025 402 Gene3D Phosphorylase Kinase; domain 1 81 186 - -
Pral4565g00025 402 FunFam PTI1-like tyrosine-protein kinase 3 188 397 - -
Pral4565g00025 402 FunFam PTI1-like tyrosine-protein kinase 3 73 186 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4565g00025 Pral-Chr4565 122307 126425 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4565g00025 45 389 Receptor kinase-like Gene Family AT4G02010 45.690 7.46e-92 290
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIII Pral4565g00025 PK_Tyr_Ser-Thr 7.3e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4565g00025 K13436 - mnt:21407434 684.1